https://github.com/gauravcodepro/pangenomemetagenomicsnormalizer
a pangenome metagenomics normalizer, given a gene ontology based presence and absence and a species file, it first summarizes the count across the species and then takes the count of the gene ontologies and present a ratio The higher the ratio the more presence of that ontology across the species.
https://github.com/gauravcodepro/pangenomemetagenomicsnormalizer
bacterial-genome-analysis bacterialmetagenomics bioinformatics fungal-metagenomics metagenomics metagenomics-counts pangenomics
Last synced: 2 months ago
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a pangenome metagenomics normalizer, given a gene ontology based presence and absence and a species file, it first summarizes the count across the species and then takes the count of the gene ontologies and present a ratio The higher the ratio the more presence of that ontology across the species.
- Host: GitHub
- URL: https://github.com/gauravcodepro/pangenomemetagenomicsnormalizer
- Owner: gauravcodepro
- License: mit
- Created: 2023-08-13T10:18:52.000Z (over 1 year ago)
- Default Branch: main
- Last Pushed: 2024-05-02T09:15:16.000Z (12 months ago)
- Last Synced: 2024-05-07T19:51:27.651Z (12 months ago)
- Topics: bacterial-genome-analysis, bacterialmetagenomics, bioinformatics, fungal-metagenomics, metagenomics, metagenomics-counts, pangenomics
- Language: Python
- Homepage:
- Size: 140 KB
- Stars: 0
- Watchers: 1
- Forks: 0
- Open Issues: 0
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Metadata Files:
- Readme: README.md
- License: LICENSE