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https://github.com/gauravcodepro/tair-gff-ids
A set of functions which will provide easy access and cleaned gff from tair and uses a dataframe and datascience approach to get the systematic tair ids and their coordinates from the tair 10 gff version. It can be applied to any version of the tair for getting the systematic retrival of the tair ids.
https://github.com/gauravcodepro/tair-gff-ids
genome genome-analysis genome-annotation genome-assembly genome-sequencing tair tair3 transcriptome-annotation transcriptome-assembly
Last synced: about 18 hours ago
JSON representation
A set of functions which will provide easy access and cleaned gff from tair and uses a dataframe and datascience approach to get the systematic tair ids and their coordinates from the tair 10 gff version. It can be applied to any version of the tair for getting the systematic retrival of the tair ids.
- Host: GitHub
- URL: https://github.com/gauravcodepro/tair-gff-ids
- Owner: gauravcodepro
- License: mit
- Created: 2023-07-17T01:35:23.000Z (over 1 year ago)
- Default Branch: main
- Last Pushed: 2024-05-02T09:15:59.000Z (8 months ago)
- Last Synced: 2024-05-07T19:51:34.828Z (8 months ago)
- Topics: genome, genome-analysis, genome-annotation, genome-assembly, genome-sequencing, tair, tair3, transcriptome-annotation, transcriptome-assembly
- Language: Python
- Homepage:
- Size: 4.69 MB
- Stars: 0
- Watchers: 1
- Forks: 0
- Open Issues: 0
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Metadata Files:
- Readme: README.md
- License: LICENSE