https://github.com/genentech/2024_cruz_etal
https://github.com/genentech/2024_cruz_etal
Last synced: about 1 year ago
JSON representation
- Host: GitHub
- URL: https://github.com/genentech/2024_cruz_etal
- Owner: Genentech
- License: mit
- Created: 2024-09-12T23:27:08.000Z (over 1 year ago)
- Default Branch: main
- Last Pushed: 2024-10-29T01:04:21.000Z (over 1 year ago)
- Last Synced: 2025-02-05T03:27:49.752Z (over 1 year ago)
- Language: Jupyter Notebook
- Size: 50.9 MB
- Stars: 0
- Watchers: 2
- Forks: 0
- Open Issues: 0
-
Metadata Files:
- Readme: README.md
- License: LICENSE
Awesome Lists containing this project
README
# Induction of a distinct macrophage population and protection from lung injury and fibrosis by Notch2 blockade
This repo has the code to reproduce figures in 2024 Cruz et al
Data has been deposited in GEO under accession numbers:
GSE243289 and GSE277297
Versions used
Library | version |
--- | --- |
scanpy | 1.9.5 |
anndata | 0.9.2 |
scvelo | 0.3.2 |
hotspot | 1.1.1 |
scipy | 1.10.1 |
matplotlib | 3.7.3 |
pySingleCellNet | 0.1 |