https://github.com/genepattern/salmon.indexer

Salmon indexer wrapper module for GenePattern.
https://github.com/genepattern/salmon.indexer

genepattern-module preprocess-and-utilities rna-seq

Last synced: 12 months ago
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Salmon indexer wrapper module for GenePattern.

• Host: GitHub
• URL: https://github.com/genepattern/salmon.indexer
• Owner: genepattern
• License: other
• Created: 2021-07-13T21:09:13.000Z (almost 5 years ago)
• Default Branch: develop
• Last Pushed: 2022-04-19T20:52:15.000Z (about 4 years ago)
• Last Synced: 2025-05-31T07:10:14.115Z (about 1 year ago)
• Topics: genepattern-module, preprocess-and-utilities, rna-seq
• Language: Shell
• Homepage: https://cloud.genepattern.org
• Size: 74.5 MB
• Stars: 0
• Watchers: 0
• Forks: 1
• Open Issues: 1
• Metadata Files:
  • Readme: README.md
  • License: LICENSE

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README

          
# Salmon.Indexer

Salmon (version 1.6.0) transcriptome indexer.\

See: [The Salmon User Guide](https://salmon.readthedocs.io/en/latest/salmon.html#using-salmon) for detailed usage guidelines