https://github.com/genepattern/stream.detectdifferentiallyexpressedgenes

Detect differentially expressed genes between pairs of trajectory branches
https://github.com/genepattern/stream.detectdifferentiallyexpressedgenes

genepattern-module rna-seq single-cell

Last synced: 4 months ago
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Detect differentially expressed genes between pairs of trajectory branches

• Host: GitHub
• URL: https://github.com/genepattern/stream.detectdifferentiallyexpressedgenes
• Owner: genepattern
• License: bsd-3-clause
• Created: 2019-08-30T17:59:15.000Z (almost 7 years ago)
• Default Branch: master
• Last Pushed: 2020-02-04T18:02:31.000Z (over 6 years ago)
• Last Synced: 2024-12-31T03:13:35.147Z (over 1 year ago)
• Topics: genepattern-module, rna-seq, single-cell
• Language: Python
• Size: 28 MB
• Stars: 0
• Watchers: 7
• Forks: 0
• Open Issues: 0
• Metadata Files:
  • Readme: README.md
  • License: LICENSE

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README

          
# STREAM.DetectDifferentiallyExpressedGenes

Detect differentially expressed genes between pairs of trajectory branches

Used to detect differentially expressed genes between pairs of branches in STREAM pseudo-time trajectories.

[Full Documentation](https://genepattern.github.io/STREAM.DetectDifferentiallyExpressedGenes/)