Ecosyste.ms: Awesome
An open API service indexing awesome lists of open source software.
https://github.com/genepattern/stream.detectlabelspecificmarkers
STREAM can be used to detect cell population-specific markers. This is similar to leaf branch marker gene detection. Here instead of comparing the gene expression values between leaf branches, we compare the gene expression values between cell populations
https://github.com/genepattern/stream.detectlabelspecificmarkers
genepattern-module rna-seq single-cell
Last synced: about 2 months ago
JSON representation
STREAM can be used to detect cell population-specific markers. This is similar to leaf branch marker gene detection. Here instead of comparing the gene expression values between leaf branches, we compare the gene expression values between cell populations
- Host: GitHub
- URL: https://github.com/genepattern/stream.detectlabelspecificmarkers
- Owner: genepattern
- License: bsd-3-clause
- Created: 2019-11-18T22:12:19.000Z (about 5 years ago)
- Default Branch: master
- Last Pushed: 2020-01-30T16:52:03.000Z (almost 5 years ago)
- Last Synced: 2023-02-26T16:52:14.881Z (almost 2 years ago)
- Topics: genepattern-module, rna-seq, single-cell
- Language: Python
- Size: 28 MB
- Stars: 0
- Watchers: 8
- Forks: 0
- Open Issues: 0