https://github.com/gersteinlab/latentdag

https://github.com/gersteinlab/latentdag

Last synced: 4 months ago
JSON representation

• Host: GitHub
• URL: https://github.com/gersteinlab/latentdag
• Owner: gersteinlab
• License: other
• Created: 2023-07-14T15:12:18.000Z (almost 2 years ago)
• Default Branch: main
• Last Pushed: 2024-07-22T21:55:58.000Z (10 months ago)
• Last Synced: 2024-11-19T10:11:38.886Z (6 months ago)
• Language: Jupyter Notebook
• Size: 6.4 MB
• Stars: 3
• Watchers: 11
• Forks: 0
• Open Issues: 0
• Metadata Files:
  • Readme: README.md
  • License: LICENSE

Awesome Lists containing this project

README

        
# LatentDAG

**Representing core gene expression activity relationships using the latent structure implicit in Bayesian networks**  

Jiahao Gao, Mark Gerstein. 2024

This repo contains the codes for the analysis presented in the paper

- preprocess/: pre-process steps to get the features and labels  

- network_\*/: create the biological or Bayesian networks  

- model_\*/: the GNN model structure and training