https://github.com/gregoryv/align

Needleman and Wunsh sequence alignment algorithm
https://github.com/gregoryv/align

align golang needleman sequence

Last synced: about 1 year ago
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Needleman and Wunsh sequence alignment algorithm

• Host: GitHub
• URL: https://github.com/gregoryv/align
• Owner: gregoryv
• License: mit
• Created: 2018-02-14T20:35:16.000Z (over 8 years ago)
• Default Branch: main
• Last Pushed: 2023-11-18T15:43:56.000Z (over 2 years ago)
• Last Synced: 2025-03-30T05:13:17.664Z (about 1 year ago)
• Topics: align, golang, needleman, sequence
• Language: Go
• Homepage:
• Size: 20.5 KB
• Stars: 1
• Watchers: 3
• Forks: 0
• Open Issues: 0
• Metadata Files:
  • Readme: README.md
  • Changelog: changelog.md
  • License: LICENSE

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README

          
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[align](https://godoc.org/github.com/gregoryv/align) - Implements Needleman and Wunsh alignment algorithm

Detailed description is found at [wikipedia Needleman-Wunsch_algorithm](https://en.wikipedia.org/wiki/Needleman%E2%80%93Wunsch_algorithm)

## Fuzzy match example

    a := "GCATGCUAAAAAAA"

    b := "GATTACAAAAAAAABBB"

    if align.Compare(a, b) > 0.7 {

        fmt.Println("similar enough")

    }