https://github.com/gurbaaz27/cs690a-clustering-spatial-transcriptomics-data
Course Assignment on Clustering of Spatial Transcriptomics Data
https://github.com/gurbaaz27/cs690a-clustering-spatial-transcriptomics-data
cancer-genomics clustering computational-biology computational-genomics deep-learning gene-expression k-means-clustering leiden-algorithm louvain-algorithm rna-seq spatial-transcriptomics transcriptomics variational-autoencoder variational-autoencoders variational-inference visium
Last synced: about 1 month ago
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Course Assignment on Clustering of Spatial Transcriptomics Data
- Host: GitHub
- URL: https://github.com/gurbaaz27/cs690a-clustering-spatial-transcriptomics-data
- Owner: gurbaaz27
- License: mit
- Created: 2022-09-26T09:03:23.000Z (over 3 years ago)
- Default Branch: main
- Last Pushed: 2022-11-01T15:19:05.000Z (over 3 years ago)
- Last Synced: 2025-07-05T15:10:18.762Z (9 months ago)
- Topics: cancer-genomics, clustering, computational-biology, computational-genomics, deep-learning, gene-expression, k-means-clustering, leiden-algorithm, louvain-algorithm, rna-seq, spatial-transcriptomics, transcriptomics, variational-autoencoder, variational-autoencoders, variational-inference, visium
- Language: Jupyter Notebook
- Homepage:
- Size: 62.2 MB
- Stars: 4
- Watchers: 1
- Forks: 0
- Open Issues: 0
-
Metadata Files:
- Readme: README.md
- License: LICENSE
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README
# cs690a assignment
the assignment question can be found in `assets/` folder
### table of content
- [team](#team)
- [usage](#usage)
- [resources](#resources)
## team
- shashank katiyar (shashkat [at] iitk [dot] ac [dot] in)
- gurbaaz singh nandra (gurbaaz [at] iitk [dot] ac [dot] in)
- antreev singh brar (antreev [at] iitk [dot] ac [dot] in)
**instructor**: [dr. hamim zafar](https://hamimzafar.wixsite.com/home)
## resources
- [SpaGCN Tutorial](https://github.com/jianhuupenn/SpaGCN/blob/master/tutorial/tutorial.md)