https://github.com/haesleinhuepf/napari-workflow-inspector

Inspect relationships between napari-plugins in active workflows.
https://github.com/haesleinhuepf/napari-workflow-inspector

napari-plugin

Last synced: 7 days ago
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Inspect relationships between napari-plugins in active workflows.

• Host: GitHub
• URL: https://github.com/haesleinhuepf/napari-workflow-inspector
• Owner: haesleinhuepf
• License: bsd-3-clause
• Created: 2021-12-04T13:01:40.000Z (over 3 years ago)
• Default Branch: main
• Last Pushed: 2022-05-28T18:29:58.000Z (almost 3 years ago)
• Last Synced: 2025-04-12T15:04:55.881Z (25 days ago)
• Topics: napari-plugin
• Language: Python
• Homepage:
• Size: 1020 KB
• Stars: 8
• Watchers: 2
• Forks: 4
• Open Issues: 3
• Metadata Files:
  • Readme: README.md
  • License: LICENSE

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README

        
# napari-workflow-inspector

[![License](https://img.shields.io/pypi/l/napari-workflow-inspector.svg?color=green)](https://github.com/haesleinhuepf/napari-workflow-inspector/raw/main/LICENSE)

[![PyPI](https://img.shields.io/pypi/v/napari-workflow-inspector.svg?color=green)](https://pypi.org/project/napari-workflow-inspector)

[![Python Version](https://img.shields.io/pypi/pyversions/napari-workflow-inspector.svg?color=green)](https://python.org)

[![tests](https://github.com/haesleinhuepf/napari-workflow-inspector/workflows/tests/badge.svg)](https://github.com/haesleinhuepf/napari-workflow-inspector/actions)

[![codecov](https://codecov.io/gh/haesleinhuepf/napari-workflow-inspector/branch/main/graph/badge.svg)](https://codecov.io/gh/haesleinhuepf/napari-workflow-inspector)

[![Development Status](https://img.shields.io/pypi/status/napari-workflow-inspector.svg)](https://en.wikipedia.org/wiki/Software_release_life_cycle#Alpha)

[![napari hub](https://img.shields.io/endpoint?url=https://api.napari-hub.org/shields/napari-workflow-inspector)](https://napari-hub.org/plugins/napari-workflow-inspector)

Inspect relationships between image processing operations in active workflows in napari. Open the inspector by clicking the menu `Tools > Visualization > Workflow Inspector`.

![img_1.png](https://github.com/haesleinhuepf/napari-workflow-inspector/raw/main/docs/screenshot_graph.png)

Also install the [napari-script-editor](https://www.napari-hub.org/plugins/napari-script-editor) 

to generate code from active workflows.

![img_2.png](https://github.com/haesleinhuepf/napari-workflow-inspector/raw/main/docs/screenshot_script_editor.png)

For recording workflows, all napari image processing plugins that use the `@time_slicer` interface are supported. See

[napari-time-slicer](https://www.napari-hub.org/plugins/napari-time-slicer) for a list. More to come, stay tuned.

## Installation

You can install `napari-workflow-inspector` via [pip]:

```

pip install napari-workflow-inspector

```

## Contributing

Contributions are very welcome. Tests can be run with [tox], please ensure

the coverage at least stays the same before you submit a pull request.

## License

Distributed under the terms of the [BSD-3] license,

"napari-workflow-inspector" is free and open source software

## Issues

If you encounter any problems, please [file an issue] along with a detailed description.

[napari]: https://github.com/napari/napari

[Cookiecutter]: https://github.com/audreyr/cookiecutter

[@napari]: https://github.com/napari

[MIT]: http://opensource.org/licenses/MIT

[BSD-3]: http://opensource.org/licenses/BSD-3-Clause

[GNU GPL v3.0]: http://www.gnu.org/licenses/gpl-3.0.txt

[GNU LGPL v3.0]: http://www.gnu.org/licenses/lgpl-3.0.txt

[Apache Software License 2.0]: http://www.apache.org/licenses/LICENSE-2.0

[Mozilla Public License 2.0]: https://www.mozilla.org/media/MPL/2.0/index.txt

[cookiecutter-napari-plugin]: https://github.com/napari/cookiecutter-napari-plugin

[file an issue]: https://github.com/haesleinhuepf/napari-workflow-inspector/issues

[napari]: https://github.com/napari/napari

[tox]: https://tox.readthedocs.io/en/latest/

[pip]: https://pypi.org/project/pip/

[PyPI]: https://pypi.org/