https://github.com/hakamadare/bioperl

https://github.com/hakamadare/bioperl

Last synced: about 19 hours ago
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• Host: GitHub
• URL: https://github.com/hakamadare/bioperl
• Owner: hakamadare
• Created: 2011-06-16T00:08:43.000Z (over 13 years ago)
• Default Branch: master
• Last Pushed: 2011-06-16T21:07:28.000Z (over 13 years ago)
• Last Synced: 2023-10-20T20:08:58.034Z (over 1 year ago)
• Language: Perl
• Homepage:
• Size: 141 KB
• Stars: 2
• Watchers: 3
• Forks: 0
• Open Issues: 0
• Metadata Files:
  • Readme: README.mkd

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README

        
# FastaParser

## Dependencies

Specs for all of these are in Repoforge.

* Dancer

* IO::stringy

* PerlIO::eol

* Tie::File::AnyData::Bio::Fasta

## Running

In one terminal:

    $ cd FastaParser/

    $ perl -Ilib ./bin/app.pl

    [49172]  core @0.000010> loading Dancer::Handler::Standalone handler in /usr/share/perl5/vendor_perl/Dancer/Handler.pm l. 40

    [49172]  core @0.000217> loading handler 'Dancer::Handler::Standalone' in /usr/share/perl5/vendor_perl/Dancer.pm l. 352

    >> Dancer 1.3060 server 49172 listening on http://0.0.0.0:3000

    == Entering the development dance floor ...

In another terminal:

    $ curl --upload-file 23-nucleotide.txt http://localhost:3000/fasta

Now look at the debug output in the first terminal.