https://github.com/heavywatal/rtumopp

🦀 R interface to tumopp
https://github.com/heavywatal/rtumopp

rcpp simulation tumor

Last synced: 7 days ago
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🦀 R interface to tumopp

• Host: GitHub
• URL: https://github.com/heavywatal/rtumopp
• Owner: heavywatal
• License: other
• Created: 2016-03-25T06:16:31.000Z (over 8 years ago)
• Default Branch: master
• Last Pushed: 2024-05-23T07:55:15.000Z (6 months ago)
• Last Synced: 2024-05-23T08:56:58.194Z (6 months ago)
• Topics: rcpp, simulation, tumor
• Language: R
• Homepage: https://heavywatal.github.io/rtumopp/
• Size: 2.23 MB
• Stars: 3
• Watchers: 4
• Forks: 1
• Open Issues: 1
• Metadata Files:
  • Readme: README.md
  • License: LICENSE

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README

        
# R interface to tumopp

[![R-CMD-check](https://github.com/heavywatal/rtumopp/actions/workflows/R-CMD-check.yaml/badge.svg)](https://github.com/heavywatal/rtumopp/actions/workflows/R-CMD-check.yaml)

[![codecov](https://codecov.io/gh/heavywatal/rtumopp/graph/badge.svg?token=S8QayYTeJ0)](https://codecov.io/gh/heavywatal/rtumopp)

[![CRAN Status Badge](https://www.r-pkg.org/badges/version/rtumopp)](https://cran.r-project.org/package=rtumopp)

This is an R interface to [tumopp](https://github.com/heavywatal/tumopp),

a tumor growth simulator in C++.

## Requirements

- Unix-like OS (macOS, Linux, etc.)

- C++17 compiler (clang++ >= Apple LLVM 12, g++ >= 8)

- [CMake](https://cmake.org/) (>= 3.18.0)

## Installation

```r

install.packages("devtools")

devtools::install_github("heavywatal/rtumopp")

```

R packages are updated at random times.

Please try to check updates once in a while and use the latest versions.

```r

update.packages()

devtools::install_github("heavywatal/rigraphlite")

devtools::install_github("heavywatal/rtumopp")

```

## Basic usage

See ["Get started" page](https://heavywatal.github.io/rtumopp/articles/tumopp.html).

Available parameters are listed in

[the API document of C++ tumopp](https://heavywatal.github.io/tumopp/group__params.html).