https://github.com/henriqueslab/nanoj-fluidics
Manual, source-code and binaries for the NanoJ-Fluidics project
https://github.com/henriqueslab/nanoj-fluidics
automation dna-paint electronics fluidics high-content lego live-cell microscopy pump storm super-resolution
Last synced: 20 days ago
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Manual, source-code and binaries for the NanoJ-Fluidics project
- Host: GitHub
- URL: https://github.com/henriqueslab/nanoj-fluidics
- Owner: HenriquesLab
- License: mit
- Created: 2018-05-01T09:44:03.000Z (over 7 years ago)
- Default Branch: master
- Last Pushed: 2022-11-07T22:12:46.000Z (almost 3 years ago)
- Last Synced: 2025-09-09T11:42:04.713Z (26 days ago)
- Topics: automation, dna-paint, electronics, fluidics, high-content, lego, live-cell, microscopy, pump, storm, super-resolution
- Language: Java
- Size: 35.5 MB
- Stars: 50
- Watchers: 13
- Forks: 8
- Open Issues: 2
-
Metadata Files:
- Readme: README.md
- License: LICENSE
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README
# NanoJ-Fluidics: open-source fluid exchange in microscopy
Note: visit the [**Wiki**][10] or [**Forum**][12] for latest updates.
![][8]
NanoJ-Fluidics is an open-source device, composed of easily accessible LEGO-parts, electronics and labware. It is designed to automate and simplify fluid exchange experiments in microscopy. Check the paper in Nature Communications: [Automating multimodal microscopy with
NanoJ-Fluidics][11].
## It consists of three parts:
+ [LEGO-based, multiplexable and compact syringe pumps][4]
+ [A simple "hack" to enable liquid exchange on cell culture dishes][5]
+ And a comprehensive [electronic][6] and [software][7] control suite to control the pumps.
This [Wiki][10] provides all the information necessary for researchers to reproduce their own systems and start performing fluidic experiments on their microscopes.
## Developers
NanoJ-Fluidics is developed in a collaboration between the [Henriques][1] and [Leterrier][9] laboratories.
## Developers
NanoJ-Fluidics is developed in a collaboration between the [Henriques][1] and [Leterrier][9] laboratories, with contributions from the community:
* [Matthew Meyer][0mgem0] (La Jolla Institute of Allergy & Immunology's Microscopy Core): 3D printed syringe pump body, v-slot adaptor, other parts (see [section](https://github.com/HenriquesLab/NanoJ-Fluidics/wiki/Pumpy-3D-Printing-MMeyer)).
* [Leo Saunders][MySaundersleo] (University of Colorado Denver): 3D printed syringe pump body (see [section](https://github.com/HenriquesLab/NanoJ-Fluidics/wiki/Pumpy-3D-Printing-LSaunders)).
[1]: http://www.ucl.ac.uk/lmcb/users/ricardo-henriques
[2]: http://www.ucl.ac.uk/lmcb/
[3]: http://www.ucl.ac.uk/
[4]: https://github.com/HenriquesLab/NanoJ-Fluidics/wiki/Pumpy-Home
[5]: https://github.com/HenriquesLab/NanoJ-Fluidics/wiki/Labware-Home
[6]: https://github.com/HenriquesLab/NanoJ-Fluidics/wiki/Electronics-Home
[7]: https://github.com/HenriquesLab/NanoJ-Fluidics/wiki/GUI-Home
[8]: https://github.com/HenriquesLab/NanoJ-Fluidics/wiki/Files/PedroPumpsSample.png
[9]: http://www.neurocytolab.org/
[10]: https://github.com/HenriquesLab/NanoJ-Fluidics/wiki
[11]: https://doi.org/10.1038/s41467-019-09231-9
[12]: https://gitter.im/NanoJ-Fluidics
[3DPrint]: Pumpy-3D-Printing
[0mgem0]: https://twitter.com/0mgem0
[MySaundersleo]: https://twitter.com/MySaundersleo