https://github.com/heurekalabsco/ddh

package containing raw functions to support the ddh app
https://github.com/heurekalabsco/ddh

Last synced: about 1 month ago
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package containing raw functions to support the ddh app

• Host: GitHub
• URL: https://github.com/heurekalabsco/ddh
• Owner: heurekalabsco
• License: mit
• Created: 2022-06-06T15:45:16.000Z (over 2 years ago)
• Default Branch: main
• Last Pushed: 2024-04-13T22:02:53.000Z (8 months ago)
• Last Synced: 2024-04-14T12:13:17.161Z (8 months ago)
• Language: R
• Size: 1.44 MB
• Stars: 0
• Watchers: 3
• Forks: 1
• Open Issues: 2
• Metadata Files:
  • Readme: README.md
  • License: LICENSE.md
  • Code of conduct: CODE_OF_CONDUCT.md

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• jimsghstars - heurekalabsco/ddh - package containing raw functions to support the ddh app (R)

README

        
# ddh 

[![Lifecycle: stable](https://img.shields.io/badge/lifecycle-stable-brightgreen.svg)](https://lifecycle.r-lib.org/articles/stages.html#stable)

[![R-CMD-check](https://github.com/matthewhirschey/ddh/actions/workflows/R-CMD-check.yaml/badge.svg)](https://github.com/matthewhirschey/ddh/actions/workflows/R-CMD-check.yaml)

This package contains functions for data analysis and graphing, data sets, and supporting materials for the [ddh web app](https://www.datadrivenhypothesis.com).

## Installation

```{r, eval = FALSE}

# install.packages("devtools")

devtools::install_github("heurekalabsco/ddh")

```

## Usage

```{r, eval = FALSE}

library(ddh)

# Load DDH data from your local directory

ddh::load_ddh_data(app_data_dir = "xxxx") # path to DDH data dir

# And start using DDH functions!

ddh::make_radial(input = list(content = "ROCK1"))

```

## Citation

Hirschey M. _Making data-driven hypotheses for gene functions by integrating dependency, expression, and literature data_. bioRxiv 2020.07.17.208751; doi: https://doi.org/10.1101/2020.07.17.208751

## Code of Conduct

Please note that the ddh project is released with a [Contributor Code of Conduct](https://contributor-covenant.org/version/2/1/CODE_OF_CONDUCT.html). By contributing to this project, you agree to abide by its terms.