https://github.com/hyperspy/rosettasciio

Python library for reading and writing scientific data format
https://github.com/hyperspy/rosettasciio

electron-microscopy hyperspectral hyperspy image multi-dimensional python raman scientific-formats

Last synced: 5 days ago
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Python library for reading and writing scientific data format

• Host: GitHub
• URL: https://github.com/hyperspy/rosettasciio
• Owner: hyperspy
• License: gpl-3.0
• Created: 2022-07-22T18:12:01.000Z (over 2 years ago)
• Default Branch: main
• Last Pushed: 2024-10-28T23:19:24.000Z (about 2 months ago)
• Last Synced: 2024-10-29T19:58:01.112Z (about 2 months ago)
• Topics: electron-microscopy, hyperspectral, hyperspy, image, multi-dimensional, python, raman, scientific-formats
• Language: Python
• Homepage: https://hyperspy.org/rosettasciio
• Size: 117 MB
• Stars: 47
• Watchers: 13
• Forks: 28
• Open Issues: 65
• Metadata Files:
  • Readme: README.md
  • Changelog: CHANGES.rst
  • Contributing: CONTRIBUTING.rst
  • License: COPYING.txt

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# RosettaSciIO



The **Rosetta Scientific Input Output library** aims at providing easy reading and

writing capabilities in Python for a wide range of

[scientific data formats](https://hyperspy.org/rosettasciio/supported_formats/index.html). Thus

providing an entry point to the wide ecosystem of python packages for scientific data

analysis and computation, as well as an interoperability between different file

formats. Just as the [Rosetta stone](https://en.wikipedia.org/wiki/Rosetta_Stone)

provided a translation between ancient Egyptian hieroglyphs and ancient Greek.

The RosettaSciIO library originates from the [HyperSpy](https://hyperspy.org)

project for multi-dimensional data analysis. As HyperSpy is rooted in the electron

microscopy community, data formats used by this community are still particularly

well represented.

RosettaSciIO provides the dataset, its axes and related metadata contained in a

file in a python dictionary that can be easily handled by other libraries.

Similarly, it takes a dictionary as input for file writers.

See the [documentation](https://hyperspy.org/rosettasciio) for further details.

### Note

RosettaSciIO has recently been split out of the [HyperSpy repository](https://github.com/hyperspy/hyperspy) and the new API is still under development. HyperSpy will use the RosettaSciIO IO-plugins from v2.0. It is already possible to import the readers directly from RosettaSciIO as follows:

```python

from rsciio import msa

msa.file_reader("your_msa_file.msa")

```