https://github.com/iliailmer/sian-web-app

This app allows to assess (local and global) identifiability/observability for models defined by systems of parametric ODEs. In addition, the app includes capability for assessing single- and multi-experiment identifiability properties.
https://github.com/iliailmer/sian-web-app

identifiability-analysis maple symbolic-computation

Last synced: 3 months ago
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This app allows to assess (local and global) identifiability/observability for models defined by systems of parametric ODEs. In addition, the app includes capability for assessing single- and multi-experiment identifiability properties.

• Host: GitHub
• URL: https://github.com/iliailmer/sian-web-app
• Owner: iliailmer
• License: mit
• Created: 2021-02-15T00:50:31.000Z (over 5 years ago)
• Default Branch: main
• Last Pushed: 2023-05-11T11:59:04.000Z (about 3 years ago)
• Last Synced: 2025-10-13T14:36:37.637Z (8 months ago)
• Topics: identifiability-analysis, maple, symbolic-computation
• Language: JetBrains MPS
• Homepage: https://maple.cloud/app/5710317752942592/SIAN
• Size: 530 KB
• Stars: 2
• Watchers: 0
• Forks: 1
• Open Issues: 0
• Metadata Files:
  • Readme: README.md
  • License: LICENSE

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README

          
# Cloud Based Structural Identifiability Toolbox 

The web-version is available [here](https://maple.cloud/app/6509768948056064/Structural+Identifiability+Toolbox).

This app allows to assess structural identifiability for models defined by systems of parametric Ordinary Differential Equations (ODEs). The app uses SIAN algorithm for computation [SIAN algorithm](https://github.com/pogudingleb/SIAN) which is presented in the following papers:

* [Global Identifiability of Differential Models](https://onlinelibrary.wiley.com/doi/abs/10.1002/cpa.21921) (Communications on Pure and Applied Mathematics, Volume 73, Issue 9, Pages 1831-1879, 2020) 

* [SIAN: software for structural identifiability analysis of ODE models](https://academic.oup.com/bioinformatics/article/35/16/2873/5270661) (Bioinformatics, Volume 35, Issue 16, Pages 2873–2874, 2019)

In addition, this program can determine identifiability of functions of parameters for Single- and Multi-Experiment scenarios as described in

* [Computing All Identifiable Functions of ODE Models](https://arxiv.org/pdf/2004.07774.pdf); for original Maple implementation see [this repo](https://github.com/pogudingleb/AllIdentifiableFunctions).