https://github.com/ilri/hpc-environment-modules

Environment modules for the ILRI, Nairobi HPC cluster
https://github.com/ilri/hpc-environment-modules

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Environment modules for the ILRI, Nairobi HPC cluster

• Host: GitHub
• URL: https://github.com/ilri/hpc-environment-modules
• Owner: ilri
• License: gpl-3.0
• Created: 2014-06-24T06:21:51.000Z (over 10 years ago)
• Default Branch: master
• Last Pushed: 2024-08-21T06:41:19.000Z (5 months ago)
• Last Synced: 2024-08-22T06:56:24.299Z (4 months ago)
• Topics: modules
• Language: Roff
• Homepage: https://hpc.ilri.cgiar.org/list-of-software
• Size: 1.44 MB
• Stars: 10
• Watchers: 10
• Forks: 8
• Open Issues: 0
• Metadata Files:
  • Readme: README.md
  • Changelog: changeo/0.3.3
  • License: COPYING

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README

        
# ILRI HPC Environment Modules

This repo contains [Environment Modules](http://modules.sourceforge.net) used in [ILRI's research computing](https://hpc.ilri.cgiar.org/) infrastructure.

For a full list of software, including build and usage instructions, see the [list of software](https://hpc.ilri.cgiar.org/list-of-software) on ILRI's HPC wiki.

## Assumptions

These modules load and unload programs installed in the `/export/apps/$SOFTWARE/$SOFTWARE_VERSION` directory.

For example, in our infrastructure, *NCBI BLAST 2.10.0+* is installed in `/export/apps/blast/2.10.0+`.

## Updates

There is a basic [nvchecker](https://github.com/lilydjwg/nvchecker) configuration that can help check for new versions of installed applications:

    $ nvchecker .nvchecker/source.ini

API keys for GitHub not included.

## License

Copyright (C) 2015–2020 International Livestock Research Institute (ILRI)

The contents of this repository are free software: you can redistribute

it and/or modify it under the terms of the GNU General Public License

as published by the Free Software Foundation, either version 3 of the

License, or (at your option) any later version.

This program is distributed in the hope that it will be useful,

but WITHOUT ANY WARRANTY; without even the implied warranty of

MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.  See the

GNU General Public License for more details.

You should have received a copy of the GNU General Public License

along with this program.  If not, see .