https://github.com/imagej/pyimagej-dextr

Where I'm working on integrating pytorch and imagej (via pyimagej). This repo is experimental.
https://github.com/imagej/pyimagej-dextr

Last synced: 22 days ago
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Where I'm working on integrating pytorch and imagej (via pyimagej). This repo is experimental.

• Host: GitHub
• URL: https://github.com/imagej/pyimagej-dextr
• Owner: imagej
• License: gpl-3.0
• Created: 2021-03-11T19:33:54.000Z (over 5 years ago)
• Default Branch: main
• Last Pushed: 2022-06-22T15:13:28.000Z (about 4 years ago)
• Last Synced: 2025-02-22T07:51:29.101Z (over 1 year ago)
• Language: Python
• Size: 6.01 MB
• Stars: 2
• Watchers: 5
• Forks: 1
• Open Issues: 0
• Metadata Files:
  • Readme: README.md
  • License: LICENSE

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README

          
# PyImageJ-DEXTR

This package uses Deep Extreme Cut ([DEXTR](https://github.com/scaelles/DEXTR-PyTorch)) to generate ImageJ ROIs via PyImageJ.

![screenshot](doc/doc_images/demo_screenshot.png)

# Installation requirements

  - python >= 3.6

  - pyimagej

  - openjdk=8

  - opencv

  - pytorch

  - torchvision

  - cpuonly (_optional_ if no CUDA cores are available)