https://github.com/imyizhang/fcsx

FCS for Humans
https://github.com/imyizhang/fcsx

Last synced: 6 days ago
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FCS for Humans

• Host: GitHub
• URL: https://github.com/imyizhang/fcsx
• Owner: imyizhang
• License: bsd-3-clause
• Created: 2022-09-20T00:44:46.000Z (about 2 years ago)
• Default Branch: main
• Last Pushed: 2022-09-20T00:45:14.000Z (about 2 years ago)
• Last Synced: 2024-09-17T00:32:59.657Z (about 2 months ago)
• Language: Python
• Homepage: https://pypi.org/project/fcsx/
• Size: 5.86 KB
• Stars: 0
• Watchers: 1
• Forks: 0
• Open Issues: 0
• Metadata Files:
  • Readme: README.md
  • License: LICENSE

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README

        
# FCSX: FCS for Humans

FCSX is 

* a very simple but fully featured Flow Cytometry Standard (FCS) reader for Python.

* written in Python Standard Library

FCSX supports to

* parse FCS 2.0, 3.0, and 3.1 versions

* create NumPy memory-mapped array for the DATA segment via installing NumPy

## Installation

```bash

pip install fcsx

```

To support NumPy memory mapping (usually faster), please install the extra dependencies as

```bash

pip install fcsx[numpy]

```

## Quick Start

```python

import fcs

f = fcs.read('./FR-FCM-ZZPH/Samusik_all.fcs')

```

## Contributing

## License

FCSX has an BSD-3-Clause license, as found in the [LICENSE](https://github.com/imyizhang/fcsx/blob/main/LICENSE) file.