https://github.com/insigneo/ph_3dpatches
A three dimension analyzer of pulmonary hypertension diseases. Three dimensional mapping of the diseases and ratio of each in the total lung area.
https://github.com/insigneo/ph_3dpatches
Last synced: 11 months ago
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A three dimension analyzer of pulmonary hypertension diseases. Three dimensional mapping of the diseases and ratio of each in the total lung area.
- Host: GitHub
- URL: https://github.com/insigneo/ph_3dpatches
- Owner: INSIGNEO
- License: mit
- Created: 2022-10-14T09:21:47.000Z (over 3 years ago)
- Default Branch: main
- Last Pushed: 2022-10-14T10:27:52.000Z (over 3 years ago)
- Last Synced: 2025-01-15T10:23:39.520Z (about 1 year ago)
- Language: Python
- Size: 49.8 KB
- Stars: 0
- Watchers: 4
- Forks: 0
- Open Issues: 0
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Metadata Files:
- Readme: README.md
- License: LICENSE.md
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README
# 3D-patches-classifier
In this study we develop an artificial intelligence (AI) framework to deliver a 3D anatomical lung model with the patient's disease profile and the uncertainty estimation of the diagnosis. We study a multi-classification problem of pulmonary hypertension diseases using different deep learning models. We estimate the epistemic and aleatoric uncertainty of the framework and datasets, and we used generalised explainable and feature engineering techniques (PCA, GradCam) to study and validate the classification predictions of the deep learning network. The AI framework was evaluated in an unbiased validation scheme (internal / unseen datasets) delivered accurate, robust and generalised results.
# If you use the code:
Please if you uce the code cite bellow studies:
# Instalation process:
cd ./PH_3Dpatches-master
pip install .
# Use process:
cd ./PH_3Dpatches-master/script/
python3 train_patch.py train_patch.config
# ENJOY :) !!!