https://github.com/int-brain-lab/iblscripts

Deployment scripts for ibl
https://github.com/int-brain-lab/iblscripts

Last synced: about 1 month ago
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Deployment scripts for ibl

• Host: GitHub
• URL: https://github.com/int-brain-lab/iblscripts
• Owner: int-brain-lab
• License: mit
• Created: 2019-05-21T13:00:12.000Z (over 5 years ago)
• Default Branch: master
• Last Pushed: 2024-05-30T13:48:23.000Z (7 months ago)
• Last Synced: 2024-05-31T13:01:12.043Z (7 months ago)
• Language: Jupyter Notebook
• Homepage:
• Size: 12.1 MB
• Stars: 3
• Watchers: 18
• Forks: 8
• Open Issues: 8
• Metadata Files:
  • Readme: README.md
  • License: LICENSE

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README

        
# iblscripts

## Tests

The `ci/tests` folder contains the ibllib integration tests.  These require a dataset found on

 FlatIron, in `/integration`.  To run these tests...

 

 1. Run the `ci/setup.py` script and following the instructions to prepare Globus for downloading 

 the data

 2. Download the integration data by running the `ci/download_data.py` script.

 3. Run the tests with `python -m unittest discover -s "./ci/tests"` or

 `python ci/runAllTests.py -l path/to/log/output/dir`

 

 NB: `test_ephys_mtscomp/TestEphysCompression` and `test_ephys_pipeline/TestEphysPipeline` require

  admin privileges in order to create symbolic links on Windows.