https://github.com/jackhump/hnrnpk
All code written for hnRNPK manuscript
https://github.com/jackhump/hnrnpk
Last synced: 5 months ago
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All code written for hnRNPK manuscript
- Host: GitHub
- URL: https://github.com/jackhump/hnrnpk
- Owner: jackhump
- Created: 2021-03-29T20:43:30.000Z (about 5 years ago)
- Default Branch: master
- Last Pushed: 2021-03-30T15:28:24.000Z (about 5 years ago)
- Last Synced: 2023-10-20T20:31:58.934Z (over 2 years ago)
- Language: R
- Size: 3.05 MB
- Stars: 0
- Watchers: 1
- Forks: 0
- Open Issues: 0
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Metadata Files:
- Readme: README.md
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README
# hnRNPK
Jack Humphrey
2019-2021
All code for analysing siRNA knockdown of hnRNP K in SH-SY5Y cells.
## Scripts:
[Preparing data](https://github.com/jackhump/hnRNPK/blob/master/scripts/hnrnpk_prepare_results.R)
[Conservation analysis](https://github.com/jackhump/hnRNPK/blob/master/scripts/hnrnpk_exon_conservation.R)
## Interactive HTML documents
[Making plots](https://jackhump.github.io/hnRNPK/docs/hnrnpk_make_plots.html)
[Motif analysis](https://jackhump.github.io/hnRNPK/docs/hnrnpk_count_motifs.html)