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https://github.com/jacobeverist/research_literature_scripts

Useful scripts for managing PDF literature
https://github.com/jacobeverist/research_literature_scripts

latex markdown obsidian-md pandoc pandocomatic remarkable scrivener scrivomatic zotero

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Useful scripts for managing PDF literature

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# Problem

I use the following applications and devices for my research, writing, and reading:
- Obsidian MD
- Zotero
- Scrivener
- Remarkable 2

I need ways to integrate their data and leverage their various strengths.

# Scripting Tools to Manage My Research Literature

I mostly use MacOS, but these should work on any OS.

Script to move PDFs to Remarkable while preserving the directory structure on the tablet OS
- [remarkable_migrate_papers.py](remarkable_migrate_papers.py)

Example script for bulk-renaming of files in the file system based on a regular expression and renaming based on regex groups
- [rename_files.py](rename_files.py)

Zotero API query to list files on Zotero hosting service
- [zotero_list_collection.py](zotero_list_collection.py)

Scrivener compilation pipeline scripts. Uses Scrivomatic, Pandocomatic, Pandoc, Biber, and Xelatex
- [scrivener_workflow](scrivener_workflow)