https://github.com/jacoby/stepone
Perl Tool for creating .EDS files for ABI StepOne qPCR systems
https://github.com/jacoby/stepone
Last synced: about 2 months ago
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Perl Tool for creating .EDS files for ABI StepOne qPCR systems
- Host: GitHub
- URL: https://github.com/jacoby/stepone
- Owner: jacoby
- License: gpl-3.0
- Created: 2012-12-13T21:09:14.000Z (over 13 years ago)
- Default Branch: master
- Last Pushed: 2013-01-07T17:50:50.000Z (over 13 years ago)
- Last Synced: 2025-01-19T17:38:15.148Z (over 1 year ago)
- Language: Perl
- Size: 137 KB
- Stars: 0
- Watchers: 3
- Forks: 0
- Open Issues: 0
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Metadata Files:
- Readme: README.md
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README
StepOne
=======
Perl Tool for creating .EDS files for ABI StepOne qPCR systems
Usage
=====
There is one user-accessable function in StepOne, which is make_eds.
It takes a hashref which contains the following:
* experiment_name, the name for the whole of the plate
* sample_names, an arrayref holding the name of each sample
* replicates, which is the number of wells per sample
* std_curve, which is a number showing the number of points on the standard curve
Usage is described in package.pl
.EDS files are ZIP files. Unzip one into ~/.stepone/Source, and this will
be the origin of most of the files created. This module only creates two,
plate_setup.xml and experiment.xml. Copy the .tt files into ~/.stepone/Templates
and Template Toolkit will be called on them.