https://github.com/jamesjcai/mbetoolbox
MBEToolbox: Matlab toolbox for molecular evolution
https://github.com/jamesjcai/mbetoolbox
matlab maximum-likelihood molecular-evolution phylip
Last synced: 12 months ago
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MBEToolbox: Matlab toolbox for molecular evolution
- Host: GitHub
- URL: https://github.com/jamesjcai/mbetoolbox
- Owner: jamesjcai
- Created: 2017-01-16T22:13:39.000Z (over 9 years ago)
- Default Branch: master
- Last Pushed: 2020-01-26T22:31:45.000Z (over 6 years ago)
- Last Synced: 2023-10-20T20:37:15.891Z (over 2 years ago)
- Topics: matlab, maximum-likelihood, molecular-evolution, phylip
- Language: C
- Homepage: https://www.ncbi.nlm.nih.gov/pubmed/15780146
- Size: 5.18 MB
- Stars: 3
- Watchers: 1
- Forks: 3
- Open Issues: 0
-
Metadata Files:
- Readme: README.md
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README
# MBEToolbox
MBEToolbox version 2.10 was released on 1 August 2006.
MBEToolbox provide various functions to manipulate biological sequence and do data analysis in molecular evolution. MBEToolbox 2.10 includes more functions for phylogenetic analyses by the maximum likelihood method. It introduces new functions for estimating site-specific evolutionary rates by using a maximum likelihood method or an empirical Bayesian method. It also incorporates several different methods for recombination detection. Multi-platform versions of the software are freely available. Please visit the MBEToolbox Web page: http://bioinformatics.org/mbetoolbox/
Don't worry about leaving your contact again for downloading, I just keep a recode of your visit for my own.
Thank you and best regards,
James Cai (jcai[at]tamu.edu)
=========================
Acknowledgement
Dr Joe Felsenstein -- Phylip package
Dr G. Perrière and Dr M Gouy -- NJplot
Dr Pavel Morozov and Dr Andrey Rzhetsky -- phyllab package
SLOBODAN VUCETIC -- protglobal.dll
Dr Rich Strauss -- NJ routine
Scott F. Smith -- Smith--Waterman
Peter Wasmeier -- choosebox.m
Zhenhai Wang -- circle.m
L. Cavin -- CSEFlagDialog.m
Scott Hirsch -- xlswrite.m
Fahad Al Mahmood -- table2word.m
emma_v0_9_4 -- tempfilename.m
Dr Joe Felsenstein -- Phylip package
Dr G. Perrière and Dr M Gouy -- NJplot
Dr Pavel Morozov and Dr Andrey Rzhetsky -- phyllab package
SLOBODAN VUCETIC -- protglobal.dll
Dr Rich Strauss -- NJ routine
Scott F. Smith -- Smith--Waterman
Peter Wasmeier -- choosebox.m
Zhenhai Wang -- circle.m
L. Cavin -- CSEFlagDialog.m
Scott Hirsch -- xlswrite.m
Fahad Al Mahmood -- table2word.m
emma_v0_9_4 -- tempfilename.m