https://github.com/jananiravi/2023-mlhd

Companion repo to Microbial genomics & ML workshop @MLHD2023
https://github.com/jananiravi/2023-mlhd

Last synced: 1 day ago
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Companion repo to Microbial genomics & ML workshop @MLHD2023

• Host: GitHub
• URL: https://github.com/jananiravi/2023-mlhd
• Owner: jananiravi
• License: mit
• Created: 2023-07-29T13:47:00.000Z (over 1 year ago)
• Default Branch: main
• Last Pushed: 2023-08-02T09:13:34.000Z (over 1 year ago)
• Last Synced: 2024-03-20T10:20:41.470Z (10 months ago)
• Language: HTML
• Homepage: https://jananiravi.github.io/2023-mlhd
• Size: 5.71 MB
• Stars: 0
• Watchers: 1
• Forks: 4
• Open Issues: 0
• Metadata Files:
  • Readme: README.md
  • License: LICENSE

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README

        
# ML for Microbial Genomics

[Codebase](//github.com/jananiravi/2023-mlhd) | [Rendered codebase w/ results](//jananiravi.github.io/2023-mlhd)

## Presented at MLHD @ICTS | Aug 2023

Before the workshop, please ensure the following are set-up

- [ ] download and install [R](https://cran.r-project.org), [RStudio](https://posit.co/download/rstudio-desktop/) | or have [Posit Cloud](https://posit.cloud) set-up

- [ ] `install.packages(c("tidyverse", "tidymodels", "glmnet", "vip", "ranger"))`

- [ ] fork/star and clone this repo locally (or download the zipped file)

## How to reach me

- [Email](mailto:[email protected])

- Website: 

- Twitter: [@jravilab](//twitter.com/jravilab) | [@janani137](//twitter.com/janani137)

- Mastodon: [@[email protected]](https://genomic.social/@jravilab)

## License and citation

Uses [MIT License](https://github.com/jananiravi/2023-mlhd/blob/main/LICENSE)

**Citation**

```

ML for Microbial Genomics.

Jacob Krol, Ethan Wolfe, Evan Brenner, Arjun Krishnan, Janani Ravi.

2023. Repository: https://github.com/jananiravi/2023-mlhd

```