https://github.com/janelia-cellmap/cellmap-segmentation-challenge
Repository of scripts to facilitate participation in CellMap's segmentation challenge. This includes downloading data, simple setups for training 2D and 3D models, workflows for prediction and post-processing on out-of-memory arrays, and evaluation of results against validation data.
https://github.com/janelia-cellmap/cellmap-segmentation-challenge
artificial-intelligence biology machine-learning ome-ngff segmentation zarr
Last synced: 3 months ago
JSON representation
Repository of scripts to facilitate participation in CellMap's segmentation challenge. This includes downloading data, simple setups for training 2D and 3D models, workflows for prediction and post-processing on out-of-memory arrays, and evaluation of results against validation data.
- Host: GitHub
- URL: https://github.com/janelia-cellmap/cellmap-segmentation-challenge
- Owner: janelia-cellmap
- License: bsd-3-clause
- Created: 2024-07-11T13:54:21.000Z (almost 2 years ago)
- Default Branch: main
- Last Pushed: 2026-02-06T22:03:03.000Z (4 months ago)
- Last Synced: 2026-02-13T00:44:21.125Z (4 months ago)
- Topics: artificial-intelligence, biology, machine-learning, ome-ngff, segmentation, zarr
- Language: Python
- Homepage: https://janelia-cellmap.github.io/cellmap-segmentation-challenge/
- Size: 5.38 MB
- Stars: 39
- Watchers: 5
- Forks: 16
- Open Issues: 11
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Metadata Files:
- Readme: README.md
- License: LICENSE