https://github.com/jcaperella29/perturb_seq_app
JCAP CRISPR Mixscape Pipeline is a user-friendly R Shiny application for interactive single-cell CRISPR screen analysis. It enables rapid quality control, visualization, and differential expression discovery using Mixscape and Seurat, all in a point-and-click environment. Ideal for researchers working with Perturb-seq data.
https://github.com/jcaperella29/perturb_seq_app
bioinformatics crispr gene-editing perturb-seq screening seurat shiny single-cell
Last synced: about 2 months ago
JSON representation
JCAP CRISPR Mixscape Pipeline is a user-friendly R Shiny application for interactive single-cell CRISPR screen analysis. It enables rapid quality control, visualization, and differential expression discovery using Mixscape and Seurat, all in a point-and-click environment. Ideal for researchers working with Perturb-seq data.
- Host: GitHub
- URL: https://github.com/jcaperella29/perturb_seq_app
- Owner: jcaperella29
- Created: 2025-07-15T00:33:52.000Z (3 months ago)
- Default Branch: main
- Last Pushed: 2025-07-15T01:37:22.000Z (3 months ago)
- Last Synced: 2025-07-15T04:47:33.934Z (3 months ago)
- Topics: bioinformatics, crispr, gene-editing, perturb-seq, screening, seurat, shiny, single-cell
- Language: R
- Homepage:
- Size: 1.15 MB
- Stars: 0
- Watchers: 0
- Forks: 0
- Open Issues: 0