https://github.com/jcaperella29/rna_seq_app
A SHINY app written in R that will perform differential expression and feature selection on RNA_SEQ data(counts matrix and phenotype data) . The app allow can prepare a PCA plot of your data, a UMAP plot , a volcano plot showing the relationship between log fold change and p-value of your top 20 genes .It also can perform pathway analysis .
https://github.com/jcaperella29/rna_seq_app
Last synced: 3 months ago
JSON representation
A SHINY app written in R that will perform differential expression and feature selection on RNA_SEQ data(counts matrix and phenotype data) . The app allow can prepare a PCA plot of your data, a UMAP plot , a volcano plot showing the relationship between log fold change and p-value of your top 20 genes .It also can perform pathway analysis .
- Host: GitHub
- URL: https://github.com/jcaperella29/rna_seq_app
- Owner: jcaperella29
- Created: 2024-07-01T19:48:41.000Z (11 months ago)
- Default Branch: main
- Last Pushed: 2024-11-13T19:16:42.000Z (6 months ago)
- Last Synced: 2024-11-13T20:24:52.311Z (6 months ago)
- Language: R
- Homepage: https://jcaperella1162.shinyapps.io/RNA_SEQ_APP_latest/
- Size: 110 KB
- Stars: 0
- Watchers: 1
- Forks: 0
- Open Issues: 0
-
Metadata Files: