https://github.com/jefferis/nat.amira

Interface Between NeuroAnatomy Toolbox and Amira Visualisation Software
https://github.com/jefferis/nat.amira

amira nat neuroanatomy neuroanatomy-toolbox r

Last synced: 27 days ago
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Interface Between NeuroAnatomy Toolbox and Amira Visualisation Software

• Host: GitHub
• URL: https://github.com/jefferis/nat.amira
• Owner: jefferis
• Created: 2015-02-17T02:56:02.000Z (over 9 years ago)
• Default Branch: master
• Last Pushed: 2019-08-09T17:54:41.000Z (about 5 years ago)
• Last Synced: 2023-04-16T09:10:56.786Z (over 1 year ago)
• Topics: amira, nat, neuroanatomy, neuroanatomy-toolbox, r
• Language: R
• Homepage: https://jefferis.github.io/nat.amira
• Size: 952 KB
• Stars: 0
• Watchers: 1
• Forks: 0
• Open Issues: 1
• Metadata Files:
  • Readme: README.md

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README

        
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# nat.amira

Simple R package for interaction with [Amira](https://www.fei.com/software/amira-for-life-sciences/)

3D visualisation software originally developed by [Zuse Institute Berlin ](http://www.zib.de/software/amira).

The main functionality is to allow neuron and surface objects in R to be opened

in Amira for 3D visualisation and rendering.

## Installation

Currently there isn't a released version on [CRAN](http://cran.r-project.org/), 

but you can use the **devtools** package to install the development version:

```r

if (!require("devtools")) install.packages("devtools")

devtools::install_github("jefferis/nat.amira")

```

Note: Windows users need [Rtools](http://www.murdoch-sutherland.com/Rtools/) and [devtools](http://CRAN.R-project.org/package=devtools) to install this way.