https://github.com/jervenbolleman/handlegraph4j

Handlegraph API in java for working with variation graph genome data.
https://github.com/jervenbolleman/handlegraph4j

biohackeu20 bioinformatics genomics variationgraph

Last synced: 19 days ago
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Handlegraph API in java for working with variation graph genome data.

• Host: GitHub
• URL: https://github.com/jervenbolleman/handlegraph4j
• Owner: JervenBolleman
• License: mit
• Created: 2020-11-22T22:27:37.000Z (about 4 years ago)
• Default Branch: main
• Last Pushed: 2024-03-27T17:01:28.000Z (9 months ago)
• Last Synced: 2024-05-18T07:42:14.175Z (8 months ago)
• Topics: biohackeu20, bioinformatics, genomics, variationgraph
• Language: Java
• Homepage:
• Size: 132 KB
• Stars: 1
• Watchers: 3
• Forks: 0
• Open Issues: 0
• Metadata Files:
  • Readme: README.md
  • License: LICENSE.md

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README

        
# handlegraph4j

Interface's in java following the [libhandlegraph](https://github.com/vgteam/libhandlegraph) code.

This library defines a set of interfaces for "Handle Graphs": genome variation graphs where all access to the graphs is mediated by opaque "handle" objects.

# Usage Instructions

Build as usual with maven

```

mvn install

```

# Copyright/License

See LICENSE.md, as code is straight translation original copyright of the C++ code is maintained.