https://github.com/jervenbolleman/odgi4j

libodig bindings for java
https://github.com/jervenbolleman/odgi4j

Last synced: 19 days ago
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libodig bindings for java

• Host: GitHub
• URL: https://github.com/jervenbolleman/odgi4j
• Owner: JervenBolleman
• Created: 2022-06-17T15:04:57.000Z (over 2 years ago)
• Default Branch: main
• Last Pushed: 2022-06-24T11:06:27.000Z (over 2 years ago)
• Last Synced: 2024-05-18T07:42:15.971Z (8 months ago)
• Language: Java
• Size: 18.3 MB
• Stars: 0
• Watchers: 2
• Forks: 0
• Open Issues: 0
• Metadata Files:
  • Readme: README.md

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README

        
# odgi4j

libodgi bindings for java

Aim to be able to access odgi files without any hassle from java.

# Building Odgi with jemalloc that is dynamically loadable

```

cd buildOdgiForJNI/

podman build .

# note the image hash in my case b13969596ce1

podman run -it b13969596ce1

# in a second terminal

podman container list

# use the container id in my case b13969596ce1

podman cp 372718eff1f1:/odgi/lib/libodgi.so ../src/main/resources/linux/amd64/libodgi.so

podman cp 372718eff1f1:/jemalloc/lib/libjemalloc.so ../src/main/resources/linux/amd64/libjemalloc.so

# then kill the container again.

```