https://github.com/jervenbolleman/rs-handlegraph-ffi

Make rs-handlegraph available for use in other languages by generating C header file and a simple lib
https://github.com/jervenbolleman/rs-handlegraph-ffi

biohackeu20 bioinformatics dna handlegraph variationgraphs

Last synced: 19 days ago
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Make rs-handlegraph available for use in other languages by generating C header file and a simple lib

• Host: GitHub
• URL: https://github.com/jervenbolleman/rs-handlegraph-ffi
• Owner: JervenBolleman
• License: mit
• Created: 2020-11-11T11:37:53.000Z (about 4 years ago)
• Default Branch: main
• Last Pushed: 2020-11-14T20:02:20.000Z (about 4 years ago)
• Last Synced: 2024-05-18T07:42:15.404Z (8 months ago)
• Topics: biohackeu20, bioinformatics, dna, handlegraph, variationgraphs
• Language: Rust
• Homepage:
• Size: 38.1 KB
• Stars: 3
• Watchers: 4
• Forks: 0
• Open Issues: 0
• Metadata Files:
  • Readme: README.md
  • License: LICENSE

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README

        
# rs-handlegraph-ffi

Make it easy to access rs-handlegraph implementations in an other language.

# java

Uses early access build of project panama e.g. 

```

 ~/bin/jdk-16/bin/java \

    -Dforeign.restricted=permit \

    --add-modules jdk.incubator.foreign \

    src/main/java/swiss/sib/swissprot/libhandlegraph-panama.java

```

```

jextract \

    -l rs_handlegraph_ffi \

    -d target/java_classes \

    -t rs.handlegraph \

    libhandlegraph-ffi-c.h 

```

```

jar cvf rs-handlegraph.jar -C target/java_classes/ .

```

# install into local mvn

mvn install:install-file  -DgroupId=rs.handlegraph -DartifactId=jextract -Dpackaging=jar -Dversion=0.0.1 -Dfile=rs-handlegraph.jar