https://github.com/jfnavarro/st_pipeline
ST Pipeline contains the tools and scripts needed to process and analyze the raw files generated with the Spatial Transcriptomics method in FASTQ format.
https://github.com/jfnavarro/st_pipeline
pipeline scrna-seq spatial-transcriptomics visium
Last synced: 6 months ago
JSON representation
ST Pipeline contains the tools and scripts needed to process and analyze the raw files generated with the Spatial Transcriptomics method in FASTQ format.
- Host: GitHub
- URL: https://github.com/jfnavarro/st_pipeline
- Owner: jfnavarro
- License: other
- Created: 2016-07-10T17:57:39.000Z (about 10 years ago)
- Default Branch: master
- Last Pushed: 2025-12-10T11:11:46.000Z (7 months ago)
- Last Synced: 2025-12-10T12:45:01.642Z (7 months ago)
- Topics: pipeline, scrna-seq, spatial-transcriptomics, visium
- Language: Python
- Homepage:
- Size: 155 MB
- Stars: 88
- Watchers: 5
- Forks: 52
- Open Issues: 10
-
Metadata Files:
- Readme: README.md
- Changelog: CHANGELOG.md
- Contributing: CONTRIBUTING.md
- License: LICENSE
- Authors: AUTHORS.md