https://github.com/jhudsl/gdscn_book_statistics_for_genomics_differential_expression
A set of lab modules for an introduction to differential gene expression
https://github.com/jhudsl/gdscn_book_statistics_for_genomics_differential_expression
anvil cloud-computing course gdscn gene-expression genomics module
Last synced: about 1 month ago
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A set of lab modules for an introduction to differential gene expression
- Host: GitHub
- URL: https://github.com/jhudsl/gdscn_book_statistics_for_genomics_differential_expression
- Owner: jhudsl
- License: cc-by-4.0
- Created: 2022-03-22T16:45:58.000Z (over 3 years ago)
- Default Branch: main
- Last Pushed: 2025-05-07T14:02:35.000Z (5 months ago)
- Last Synced: 2025-05-07T14:51:15.530Z (5 months ago)
- Topics: anvil, cloud-computing, course, gdscn, gene-expression, genomics, module
- Language: CSS
- Homepage: https://jhudatascience.org/GDSCN_Book_Statistics_for_Genomics_Differential_Expression/
- Size: 10.3 MB
- Stars: 0
- Watchers: 4
- Forks: 1
- Open Issues: 2
-
Metadata Files:
- Readme: README.md
- License: LICENSE.md
- Code of conduct: code_of_conduct.md
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README
## AnVIL Template
Based on [_Online Tools for Training Resources (OTTR)_](https://github.com/jhudsl/OTTR_Template)
The purpose of this template and is to make publishing maintenance for AnVIL content across multiple different platforms _less painful_.
_This template helps you_:
- Edit and write an AnVIL course in [RMarkdown files](https://rmarkdown.rstudio.com/) and have it published to multiple different platforms:
- [Leanpub](https://leanpub.com/bookstore?type=course)
- [Bookdown](https://bookdown.org/)
- [Coursera](https://www.coursera.org/)
- Have [Github action robots](https://github.com/jhudsl/OTTR_Template/wiki/How-to-set-up-and-customize-GitHub-actions-robots) do your repetitive tasks like spell check and re-rendering.
- Use [automagic conversion](https://github.com/jhudsl/ottrpal) to ease the lift of prepping the material for different platforms' formats.
- Use [our Docker image](https://hub.docker.com/repository/docker/jhudsl/course_template) for consistency across authors as well as to help you [avoid dependency hell](https://en.wikipedia.org/wiki/Dependency_hell).
## To Get Started
- Go to the [OTTR Wiki page](https://github.com/jhudsl/OTTR_Template/wiki/Getting-started)
- Please take a look at the [code of conduct](./code_of_conduct.md).
- If you encounter any problems or have improvement ideas for this template repository, please [file an issue](https://github.com/jhudsl/AnVIL_bookdown_style/issues/new/choose)! Issues for the parent repository (the OTTR template repository) are also very much appreciated and can be submitted [here](https://github.com/jhudsl/OTTR_Template/issues/new/choose).
# {Course Name}
[](https://github.com/jhudsl/OTTR_Template/actions/workflows/render-all.yml)
This course was created from [the AnVIL Template](https://github.com/jhudsl/AnVIL_bookdown_style), which is based on [the OTTR Template](https://github.com/jhudsl/OTTR_Template)
You can see the rendered course material here: {Link to rendered bookdown and/or to the Leanpub. Will look something like: https://jhudatascience.org/{Course_Name}}
## About this course
This course introduces {info on what this course introduces}
## Learning Objectives
This course will teach learners to:
- {You can use https://www.bobpikegroup.com/trainer-blog/5-steps-to-writing-clear-and-measurable-learning-objectives to define some learning objectives here}
- {More learning objectives}
## Encountering problems?
If you are encountering any problems with this course, please file a GitHub issue or contact us at {Some email or web address with a contact form}.
All materials in this course are licensed under a Creative Commons Attribution 4.0 International License unless noted otherwise.