https://github.com/jiagengchang/myegpt

MyeGPT: a conversational bioinformatics agent for multiple myeloma research
https://github.com/jiagengchang/myegpt

agentic-ai fastapi langchain-python multiple-myeloma

Last synced: about 2 months ago
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MyeGPT: a conversational bioinformatics agent for multiple myeloma research

• Host: GitHub
• URL: https://github.com/jiagengchang/myegpt
• Owner: JiaGengChang
• License: other
• Created: 2025-06-18T16:53:24.000Z (about 1 year ago)
• Default Branch: main
• Last Pushed: 2026-03-04T15:04:14.000Z (4 months ago)
• Last Synced: 2026-03-04T22:11:26.858Z (4 months ago)
• Topics: agentic-ai, fastapi, langchain-python, multiple-myeloma
• Language: Python
• Homepage: https://chat.myegpt.com
• Size: 21.6 MB
• Stars: 0
• Watchers: 0
• Forks: 0
• Open Issues: 0
• Metadata Files:
  • Readme: README.md
  • License: LICENSE.md

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README

          
# MyeGPT

An agentic conversation application for researchers to mine the MMRF-CoMMpass dataset, built with LangChain.

It aims to accelerate hypothesis generation among wet-lab researchers by giving access to clinical cohort data at their fingertips.



# Demonstration

1. Gene expression heatmap

https://github.com/user-attachments/assets/900501d4-bd6b-4141-9ab6-42817acabeaf

2. Survival regression

https://github.com/user-attachments/assets/e8aaf750-44ea-4f4d-8774-a7ce8f1f8039

# Compatibility

MyeGPT is intended for desktop use but also works on smartphones i.e. devices with viewport width < 768px

Supported browsers: Chrome, Firefox, Safari

| Browser | Brave | Chrome | Edge | Firefox | Opera | Safari |

|---|---|---|---|---|---|---|

| Compatibility | ❌ | ✅️ | ❌ | ✅️ | ❌ | ✅️ |

# Publicity

Best oral presentation in the Youth Forum for ICBBS 2025 at Xiamen, 18 October ([link to press release](https://www.icbbs.org/best.html)).

[![Presentation](src/static/thumbnail.png)](https://youtu.be/pcfDr0uDm3o)

# Acknowledgements

- Multiple Myeloma Research Foundation (MMRF) 

- Participants of the CoMMpass trial (NCT01454297)

- Prof Chng Wee Joo, CSI, NUS for research funding

# License

- This project is open source under [Dual Licensing](LICENSE.md)