https://github.com/jistr/seq2fasta

Converts one or more DNA bare sequence files (.seq) into one FASTA format file (.fas).
https://github.com/jistr/seq2fasta

converter dna fas fasta seq

Last synced: 3 months ago
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Converts one or more DNA bare sequence files (.seq) into one FASTA format file (.fas).

• Host: GitHub
• URL: https://github.com/jistr/seq2fasta
• Owner: jistr
• License: other
• Created: 2015-01-02T14:38:47.000Z (about 11 years ago)
• Default Branch: master
• Last Pushed: 2015-01-02T14:46:47.000Z (about 11 years ago)
• Last Synced: 2025-02-11T10:58:32.421Z (11 months ago)
• Topics: converter, dna, fas, fasta, seq
• Language: Python
• Size: 117 KB
• Stars: 0
• Watchers: 3
• Forks: 0
• Open Issues: 0
• Metadata Files:
  • Readme: README.md
  • License: LICENSE

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README

          
seq2fasta

=========

Converts one or more DNA bare sequence files (.seq) into one FASTA

format file (.fas).

The program is intended for and tested in Linux terminal environment.

Installation

------------

Run these in the terminal:

```

cd /usr/local/bin

sudo wget https://raw.githubusercontent.com/jistr/seq2fasta/master/seq2fasta.py

sudo chmod 0755 seq2fasta.py

```

Usage example

-------------

```

seq2fasta.py first.seq second.seq third.seq > all_sequences.fas

```

Or, if you want to convert all .seq files in the current directory:

```

seq2fasta.py *.seq > all_sequences.fas

```

License

-------

GNU AGPL v3 or later

Authors

-------

Kamila Brazdilova and Jiri Stransky