https://github.com/jkh1/perlstuff

https://github.com/jkh1/perlstuff

computational-biology machine-learning perl

Last synced: about 2 months ago
JSON representation

• Host: GitHub
• URL: https://github.com/jkh1/perlstuff
• Owner: jkh1
• License: other
• Created: 2014-07-09T20:20:21.000Z (over 10 years ago)
• Default Branch: master
• Last Pushed: 2021-02-16T08:32:53.000Z (almost 4 years ago)
• Last Synced: 2024-03-16T08:10:28.784Z (10 months ago)
• Topics: computational-biology, machine-learning, perl
• Language: Perl
• Size: 290 KB
• Stars: 3
• Watchers: 1
• Forks: 2
• Open Issues: 0
• Metadata Files:
  • Readme: README.md
  • License: LICENSE

Awesome Lists containing this project

README

        
Some useful perl modules I have written:

- Algorithms::Matrix: an object-oriented matrix manipulation and linear algebra library (requires [Inline::C](https://github.com/ingydotnet/inline-c-pm))

    

- Algorithms::Cube: an object-oriented library for third order tensors (requires Algorithms::Matrix)

- Algorithms::Graph: extends Graph::Undirected (requires [Graph::Undirected](http://search.cpan.org/~jhi/Graph/lib/Graph/Undirected.pm))

- Algorithms::FCM: fuzzy c-means clustering (requires [Inline::C](https://github.com/ingydotnet/inline-c-pm))

    

- Algorithms::RVM: relevance vector machine for classification (requires Algorithms::Matrix)

- Algorithms::TimeSeries: extends Algorithms::Matrix with methods for time series (requires Algorithms::Matrix)

- Algorithms::Kernel: extends Algorithms::Matrix with methods to compute and manipulate kernels (requires Algorithms::Matrix)

- Algorithms::HMM: hidden Markov model (requires Algorithms::Matrix)

- Algorithms::GMM: Gaussian mixture model (requires Algorithms::Matrix)

- HDF5: perl wrapper for the [hdf5 library](http://www.hdfgroup.org/HDF5/)

- CellH5: perl API to the [CellH5](http://www.cellh5.org/) file format (requires HDF5)

- Labstuff: perl objects to represent various lab items (requires [Sereal](http://search.cpan.org/~yves/Sereal/lib/Sereal.pm))