https://github.com/jkobject/geneformer

https://github.com/jkobject/geneformer

Last synced: 5 months ago
JSON representation

• Host: GitHub
• URL: https://github.com/jkobject/geneformer
• Owner: jkobject
• Created: 2023-10-31T13:12:52.000Z (over 2 years ago)
• Default Branch: main
• Last Pushed: 2025-08-18T09:40:32.000Z (10 months ago)
• Last Synced: 2025-12-13T03:56:21.714Z (7 months ago)
• Language: Jupyter Notebook
• Size: 163 MB
• Stars: 86
• Watchers: 2
• Forks: 14
• Open Issues: 10
• Metadata Files:
  • Readme: README.md

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• awesome-single-cell - geneformer - [Python] a single-cell large model training on 30 million human single-cell transcriptomics, supporting batch integration, gene dosage sensitivity predictions, chromatin dynamics prediction, network dynamics prediction, etc. manuscript open access: [Transfer learning enables predictions in network biology](https://www.nature.com/articles/s41586-023-06139-9) (Software packages / Single cell large model)