https://github.com/jmdeldin/rna_sec

Ruby library for representing RNA secondary structures as tree data structures. (Unmaintained.)
https://github.com/jmdeldin/rna_sec

Last synced: about 1 month ago
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Ruby library for representing RNA secondary structures as tree data structures. (Unmaintained.)

• Host: GitHub
• URL: https://github.com/jmdeldin/rna_sec
• Owner: jmdeldin
• License: mit
• Created: 2013-05-07T08:03:58.000Z (over 11 years ago)
• Default Branch: master
• Last Pushed: 2013-05-13T07:10:18.000Z (over 11 years ago)
• Last Synced: 2023-04-13T07:51:08.906Z (over 1 year ago)
• Language: Ruby
• Size: 142 KB
• Stars: 0
• Watchers: 2
• Forks: 0
• Open Issues: 0
• Metadata Files:
  • Readme: README.rdoc
  • License: LICENSE.txt

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README

        
= RNASec

RNASec is a library for representing RNA secondary structures as tree

data structures.

== Usage

To ``evolve back'' to the MBE1A tree, execute

  $ bin/ga -d data/mbe1a.ct

For available options, execute

  $ bin/ga -h

== Requirements

Ruby 1.9 is required. If you wish to run unit tests, you will need to

follow these steps:

  # Install `bundler':

  $ gem install bundler

  # Install all dependencies:

  $ bundle install

Then you can test and develop:

  # Run tests:

  $ rake test

  # Documentation:

  $ rake yard

  # Coverage/stats:

  $ rake rcov

== Author

Jon-Michael Deldin