https://github.com/jni/halfway-to-i2k-skimage-napari

Repo for halfway to i2k workshop: Fundamentals of image analysis in Python with scikit-image, napari, and friends
https://github.com/jni/halfway-to-i2k-skimage-napari

Last synced: about 1 month ago
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Repo for halfway to i2k workshop: Fundamentals of image analysis in Python with scikit-image, napari, and friends

• Host: GitHub
• URL: https://github.com/jni/halfway-to-i2k-skimage-napari
• Owner: jni
• License: bsd-3-clause
• Created: 2023-10-06T05:12:37.000Z (about 1 year ago)
• Default Branch: main
• Last Pushed: 2023-10-19T05:01:19.000Z (about 1 year ago)
• Last Synced: 2024-10-05T00:31:22.242Z (about 2 months ago)
• Language: Python
• Size: 28.1 MB
• Stars: 6
• Watchers: 2
• Forks: 0
• Open Issues: 0
• Metadata Files:
  • Readme: README.md
  • License: LICENSE

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README

        
# Fundamentals of image analysis in Python with scikit-image, napari, and friends

See the [tutorial page on the I2K site for

details](https://www.i2kconference.org/workshops#table).

## Installation & running this tutorial

⚠️ WARNING: You should reinstall this just before the workshop as we might

have made some changes by then. ⚠️

First you need to download this tutorial repository to your local machine.

You can do so in one of two ways:

- If you are familiar with git, clone this repository with the command:

  ```sh

  git clone https://github.com/jni/halfway-to-i2k-skimage-napari

  ```

  And navigate to the cloned repository.

- Otherwise, download the repository as a zip file directly using this link:

  https://github.com/jni/halfway-to-i2k-skimage-napari/archive/refs/heads/main.zip

  Then, using your file browser, navigate to the downloaded file, unzip it

  (optionally to a different location on your computer), and navigate to the

  contents of the folder `halfway-to-i2k-skimage-napari`.

At this point, follow the installation instructions in the file

[`tutorial/install_dependencies.md`](https://github.com/jni/halfway-to-i2k-skimage-napari/blob/main/tutorial/install_dependencies.md)