https://github.com/johnaparker/stoked
Simulation and visualization of Stokesian dynamics for N interacting particles
https://github.com/johnaparker/stoked
brownian-motion dynamics hydrodynamics
Last synced: 7 months ago
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Simulation and visualization of Stokesian dynamics for N interacting particles
- Host: GitHub
- URL: https://github.com/johnaparker/stoked
- Owner: johnaparker
- License: mit
- Created: 2019-05-07T19:39:43.000Z (over 6 years ago)
- Default Branch: master
- Last Pushed: 2020-09-01T03:52:35.000Z (about 5 years ago)
- Last Synced: 2025-01-27T11:24:26.524Z (8 months ago)
- Topics: brownian-motion, dynamics, hydrodynamics
- Language: Python
- Size: 120 KB
- Stars: 3
- Watchers: 4
- Forks: 0
- Open Issues: 7
-
Metadata Files:
- Readme: README.md
- License: LICENSE.md
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README
StokeD
==============
StokeD solves the Stokesian dynamics (SD) equations for N interacting particles. SD is a generalization of Brownian dynamics (BD) that includes hydrodynamic coupling interactions.
Features
--------------
+ Hydrodynamic coupling interactions can be turned on or off
+ Flexible interface for user-defined particle interactions
+ Several interactions already available: point electrostatics and electrodynamics, screened Coulomb, van der Walls, hard-sphere collisions, gravity
+ Animation module for visualizing trajectories
Installation
--------------
StokeD can be installed with pip
```shell
pip install stoked
```
Usage
--------------
For examples and use cases, see examples folder.
For full documentation, see docs folder.
License
--------------
StokeD is licensed under the terms of the MIT license.