https://github.com/jokergoo/cola_supplementary
Supplementary for cola manuscript
https://github.com/jokergoo/cola_supplementary
Last synced: 3 months ago
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Supplementary for cola manuscript
- Host: GitHub
- URL: https://github.com/jokergoo/cola_supplementary
- Owner: jokergoo
- Created: 2020-02-04T13:16:50.000Z (over 5 years ago)
- Default Branch: master
- Last Pushed: 2020-09-02T19:48:19.000Z (almost 5 years ago)
- Last Synced: 2025-01-28T16:34:36.503Z (5 months ago)
- Language: HTML
- Homepage: https://jokergoo.github.io/cola_supplementary
- Size: 185 MB
- Stars: 0
- Watchers: 3
- Forks: 0
- Open Issues: 0
-
Metadata Files:
- Readme: README.Rmd
Awesome Lists containing this project
README
This repository contains supplementary files for the manuscript 'cola: an R/Bioconductor Package for Consensus Partitioning through a General Framework'.
```{r, results = "asis", echo = FALSE, warning = FALSE}
library(rmarkdown)
rmd_files = scan(pipe("ls */*.Rmd"), what = "character")
ind = gsub("suppl_(\\d+)_.*$", "\\1", basename(rmd_files))
ind = as.numeric(ind)
title = sapply(rmd_files, function(x) yaml_front_matter(x)$title)
desc = sapply(rmd_files, function(x) {
desc = yaml_front_matter(x)$description
if(is.null(desc)) desc = ""
desc
})
od = order(ind)
ind = ind[od]
title = title[od]
desc = desc[od]
rmd_files = rmd_files[od]
library(GetoptLong)
qqcat("- Supporting material @{ind}: [@{title}](https://jokergoo.github.io/cola_supplementary/@{gsub('Rmd$', 'html', rmd_files)})\n")
```