https://github.com/jonathanfischer97/interactiveoscillator
Interactive sensitivity analysis of my biochemical oscillator model. Uses GLMakie to allow fast and reactive resolving and plotting of the ODE solutions.
https://github.com/jonathanfischer97/interactiveoscillator
biochemical-oscillator interactive-visualizations makie ode-model reactive
Last synced: 2 months ago
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Interactive sensitivity analysis of my biochemical oscillator model. Uses GLMakie to allow fast and reactive resolving and plotting of the ODE solutions.
- Host: GitHub
- URL: https://github.com/jonathanfischer97/interactiveoscillator
- Owner: jonathanfischer97
- Created: 2024-03-26T14:44:56.000Z (about 1 year ago)
- Default Branch: master
- Last Pushed: 2024-06-22T00:11:40.000Z (12 months ago)
- Last Synced: 2025-02-03T09:54:53.995Z (4 months ago)
- Topics: biochemical-oscillator, interactive-visualizations, makie, ode-model, reactive
- Language: Julia
- Homepage:
- Size: 2.64 MB
- Stars: 1
- Watchers: 1
- Forks: 0
- Open Issues: 1
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Metadata Files:
- Readme: README.md
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README
# Installation
### Install Julia
To install the latest version of Julia, follow the `juliaup` installation guide here:
https://github.com/JuliaLang/juliaup/blob/61c09c460ca3a150e542522be8b8b8a5041e718a/README.md
### Clone this repository
`git clone [email protected]:jonathanfischer97/InteractiveOscillator.git`
### Instantiate Julia environment
In order to reproduce the necessary package environment, first:
1. `cd` into the cloned repository.
2. Run `julia --project -e 'using Pkg; Pkg.instantiate()'`
# Running interactive visualization
To open the interactive visualization window, run the main script with `julia --project visualizer.jl`.
This will open up a separate window that looks like this: