https://github.com/jstockwin/epiestimapp

Source code for the EpiEstim app.
https://github.com/jstockwin/epiestimapp

disease disease-spread epidemics epidemiology modelling r transmission

Last synced: 10 days ago
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Source code for the EpiEstim app.

• Host: GitHub
• URL: https://github.com/jstockwin/epiestimapp
• Owner: jstockwin
• License: mit
• Created: 2016-12-11T14:09:55.000Z (almost 8 years ago)
• Default Branch: master
• Last Pushed: 2020-06-04T09:05:13.000Z (over 4 years ago)
• Last Synced: 2024-10-14T14:26:38.195Z (24 days ago)
• Topics: disease, disease-spread, epidemics, epidemiology, modelling, r, transmission
• Language: R
• Homepage: https://github.com/jstockwin/EpiEstimApp/wiki
• Size: 57.9 MB
• Stars: 31
• Watchers: 10
• Forks: 11
• Open Issues: 4
• Metadata Files:
  • Readme: README.md
  • License: LICENSE

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README

        
[![Build Status](https://travis-ci.org/jstockwin/EpiEstimApp.svg?branch=master)](https://travis-ci.org/jstockwin/EpiEstimApp)

# TransmissibilityEstimator

This application estimates disease transmissibility from incidence time series and time-censored serial interval data.

The authors request users to cite the original publication when referring to this tool, the format or results generated from it: Thompson RN, Stockwin JE, van Gaalen RD, Polonsky JA, et al. Improved inference of time-varying reproduction numbers during infectious disease outbreaks. _Epidemics_ (2019). https://www.sciencedirect.com/science/article/pii/S1755436519300350

https://github.com/jstockwin/EpiEstimApp/wiki