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https://github.com/juniors90/pymaciesarg
An extension that registers all pharmacies in Argentina.
https://github.com/juniors90/pymaciesarg
argentina datascience etl-automation etl-framework etl-job etl-pipeline etl-pipelines pharmacies pharmacy pypi-package python
Last synced: 19 days ago
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An extension that registers all pharmacies in Argentina.
- Host: GitHub
- URL: https://github.com/juniors90/pymaciesarg
- Owner: juniors90
- License: mit
- Created: 2022-10-15T17:17:42.000Z (about 2 years ago)
- Default Branch: main
- Last Pushed: 2022-10-16T08:36:43.000Z (about 2 years ago)
- Last Synced: 2024-10-01T13:18:19.989Z (3 months ago)
- Topics: argentina, datascience, etl-automation, etl-framework, etl-job, etl-pipeline, etl-pipelines, pharmacies, pharmacy, pypi-package, python
- Language: Python
- Homepage: http://pymaciesarg.readthedocs.io/
- Size: 26.9 MB
- Stars: 0
- Watchers: 1
- Forks: 0
- Open Issues: 0
-
Metadata Files:
- Readme: README.md
- Changelog: CHANGELOG.rst
- License: LICENSE
Awesome Lists containing this project
README
# PymaciesArg
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[](https://codecov.io/gh/juniors90/PymaciesArg)
[](https://pymaciesarg.readthedocs.io/en/latest/?badge=latest)
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[](https://github.com/psf/black)
PymaciesArg is an extension that registers all pharmacies in Argentina.
## Features
- [x] [Data generation and extration](https://datos.gob.ar/dataset/salud-listado-establecimientos-farmacias).
## Requirements
Python 3.8+
## Dependecies for this project.
- [pandas==1.5.0](https://pandas.pydata.org/) for build the backend.
- [requests==2.28.1](https://requests.readthedocs.io/en/latest/) for build the backend.
## intallation
You can install via pip:
```cmd
$> pip install PymaciesArg
```
## Example
Register the extension:
```python
import os
import pathlib
import click
from pymacies_arg import (
DepartmentsLoader,
LocationsLoader,
PharmaciesLoader,
PymaciesArg,
TABLE_NAMES,
)
from sqlalchemy import create_engine
# this path is pointing to project/
PATH = os.path.abspath(os.path.dirname(__file__))
SQLALCHEMY_DATABASE_URI = "sqlite:///" + PATH + "/db_data.db"
engine = create_engine(SQLALCHEMY_DATABASE_URI)
# this path is pointing to project/sample_app_sqlite
CURRENT_PATH = pathlib.Path(os.path.abspath(os.path.dirname(__file__)))
query1 = """CREATE TABLE IF NOT EXISTS pharmacies (
"id" INTEGER PRIMARY KEY,
"name" VARCHAR(255) NOT NULL,
"id_location" INTEGER NOT NULL,
"id_department" INTEGER NOT NULL,
"postal_code" INTEGER NOT NULL,
"adress" VARCHAR(255) NOT NULL);"""
query2 = """CREATE TABLE IF NOT EXISTS department (
"id_department" INTEGER NOT NULL PRIMARY KEY,
"department" VARCHAR(255) NOT NULL,
FOREIGN KEY (id_department) REFERENCES pharmacies(id_department));"""
query3 = """CREATE TABLE IF NOT EXISTS "locations"(
"id_location" INTEGER PRIMARY KEY,
"location" VARCHAR(255) NOT NULL,
FOREIGN KEY (id_location) REFERENCES pharmacies(id_location));"""
def create_table():
with engine.connect() as conn:
for tname in TABLE_NAMES[0:3]:
print(f"create table {tname}")
for q in [query1, query2, query3]:
conn.execute(f"DROP TABLE IF EXISTS {tname};")
conn.execute(q)
# : configure the command for run pipeline.
@click.command()
@click.option("--date", help="run date in format yyyy-mm-dd")
@click.argument("province")
def run_pipeline(date, province) -> None:
pymacies = PymaciesArg(date, CURRENT_PATH)
# Extract
print("Extracting")
file_paths = pymacies.extract_raws()
# Transform
print("Tansform")
paths = pymacies.trasform_raws(file_paths, province)
# Load
print("Loading")
PharmaciesLoader(engine).load_table(paths[0])
LocationsLoader(engine).load_table(paths[1])
DepartmentsLoader(engine).load_table(paths[2])
# Done
print("Done!")
if __name__ == "__main__":
create_table()
run_pipeline()
```
1. run the following command line:
```shell script
$> python -m scripts --date 2022-10-16 "BUENOS AIRES"
```
## Recommended running instructions for dev:
1. Create a virtual environment:
```shell script
$> python3 -m venv venv
```
2. Activate the newly created environment:
On macOS and Linux:
```shell script
$> source venv/bin/activate
```
On Windows
```
c:\> .\env\Scripts\activate
```
3. Install dependencies:
```shell script
$> (venv) python -m pip install -r requirements/dev.txt
```
4. Start the sample app on server locally:
```shell script
$> (venv) pip install -e .
```
5. Start the sample app on server locally:
```shell script
$> (venv) python application/pipeline.py
10/16/2022 04:58:34 AM - pymacies_arg - INFO - Extracting
10/16/2022 04:58:35 AM - pymacies_arg - INFO - Tansform
10/16/2022 04:58:38 AM - pymacies_arg - INFO - Loading
10/16/2022 04:58:40 AM - pymacies_arg - INFO - Done!
```
## Links
- [Documentation](https://pymaciesarg.readthedocs.io)
- [Example Application using Postgresql](https://github.com/juniors90/PymaciesArg/tree/main/sample_app_postgres)
- [Example Application using sqlite](https://github.com/juniors90/PymaciesArg/tree/main/sample_app_sqlite)
- [PyPI Releases](https://pypi.org/project/PymaciesArg/)
- [Changelog](https://github.com/juniors90/PymaciesArg/blob/main/CHANGELOG.rst)
## Authors
- Ferreira, Juan David
Please submit bug reports, suggestions for improvements and patches via
the (E-mail: [email protected]).
## Contributors
Credits goes to these peoples:
## Official repository and Issues
- https://github.com/juniors90/PymaciesArg
## License
`PymaciesArg` is free software you can redistribute it and/or modify it
under the terms of the MIT License. For more information, you can see the
[LICENSE](https://github.com/juniors90/PymaciesArg/blob/main/LICENSE) file
for details.