https://github.com/junolab/language-weave
Atom syntax highlighting for Weave.jl and Pweave documents. Currently supports markdown input formats.
https://github.com/junolab/language-weave
hydrogen julia pweave python reproducible-research
Last synced: 11 months ago
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Atom syntax highlighting for Weave.jl and Pweave documents. Currently supports markdown input formats.
- Host: GitHub
- URL: https://github.com/junolab/language-weave
- Owner: JunoLab
- License: mit
- Created: 2016-04-25T18:20:50.000Z (almost 10 years ago)
- Default Branch: master
- Last Pushed: 2023-04-17T04:44:46.000Z (almost 3 years ago)
- Last Synced: 2025-03-22T07:33:06.303Z (12 months ago)
- Topics: hydrogen, julia, pweave, python, reproducible-research
- Language: JavaScript
- Homepage: https://atom.io/packages/language-weave
- Size: 70.3 KB
- Stars: 21
- Watchers: 8
- Forks: 9
- Open Issues: 19
-
Metadata Files:
- Readme: README.md
- Changelog: CHANGELOG.md
- License: LICENSE
Awesome Lists containing this project
README
# Atom support Weave.jl and Pweave
Atom syntax highlighting for [Weave.jl](http://weavejl.mpastell.com) and
[Pweave](http://mpastell.com/pweave) documents.
Provides the following modes:
- `Weave.jl: markdown` for .jmd, .mdw and .jmdw (markdown with noweb)
- `Weave.jl: LaTex` for texw, .jtexw and .jnw.
- `Weave.jl: reStructuredText` for .jrstw
- `Pweave: markdown` for .pmd and .pmdw (markdown with noweb)
- `Pweave: LaTex` for .ptexw and .pnw
- `Pweave: reStructuredText` for .prstw and .rstw
If you need support for other formats open as issue or make a pull request.
## Run code using Hydrogen
[Hydrogen](https://github.com/nteract/hydrogen) supports running code from Pweave and Weave code chunks using
its [rich multi language document](https://blog.nteract.io/hydrogen-introducing-rich-multi-language-documents-b5057ff34efc)
-feature.
For Python you simply need to install Hydrogen and you can use hydrogen keybindings to run code e.g `ctrl-enter` to run a line and `ctrl-alt-enter` to run entire chunk.
For Julia you need to add the following to `.atom/keymap.cson` if you want to use Hydrogen instead of Juno:
```coffee
'.platform-linux .item-views > atom-text-editor[data-grammar="source weave md"],
.platform-linux .item-views > atom-text-editor[data-grammar="source weave latex"],
.platform-win32 .item-views > atom-text-editor[data-grammar="source weave md"],
.platform-win32 .item-views > atom-text-editor[data-grammar="source weave latex"]':
'ctrl-enter': 'hydrogen:run'
'shift-enter': 'hydrogen:run-and-move-down'
'.platform-darwin .item-views > atom-text-editor[data-grammar="source weave md"],
.platform-darwin .item-views > atom-text-editor[data-grammar="source weave latex"]':
'cmd-enter': 'hydrogen:run'
'shift-enter': 'hydrogen:run-and-move-down'
```
## Run Julia code using Juno
If you have installed [Juno](http://junolab.org/), running code from Weave.jl documents works using `ctrl-enter` and `shift-enter` keybindings.