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https://github.com/kbroman/JSM2016slides

Links to slides for talks at the 2016 Joint Statistical Meetings in Chicago
https://github.com/kbroman/JSM2016slides
Last synced: 3 days ago
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Links to slides for talks at the 2016 Joint Statistical Meetings in Chicago
Host: GitHub
URL: https://github.com/kbroman/JSM2016slides
Owner: kbroman
Created: 2016-08-01T03:45:42.000Z (over 8 years ago)
Default Branch: master
Last Pushed: 2022-04-25T20:51:27.000Z (over 2 years ago)
Last Synced: 2024-08-02T06:02:47.715Z (3 months ago)
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Watchers: 10
Forks: 22
Open Issues: 0
Metadata Files:
- Readme: ReadMe.md
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README

        # Links to slides from JSM 2016

Links to slides to talks at the 2016

[Joint Statistical Meetings](https://www.amstat.org/meetings/jsm/2016/)

in Chicago, Illinois.

Pull requests welcome! Or add an issue or email

[Karl Broman](http://kbroman.org).

## Sunday, 31 July

### 2:00pm - 3:50pm

#### [6 Open Source Statistical Software for Data Science](https://www.amstat.org/meetings/jsm/2016/onlineprogram/ActivityDetails.cfm?SessionID=212387)

- Skipper Seabold, [@jseabold](https://twitter.com/jseabold),

[Having an impact as a modern statistician: Lessons from Software Engineering](https://speakerdeck.com/jseabold/having-an-impact-as-a-modern-statistician)

- Jake VanderPlas, [@jakevdp](https://twitter.com/jakevdp),

[Python's Data Science Stack](https://speakerdeck.com/jakevdp/pythons-data-science-stack-jsm-2016)

- [Dirk Eddelbuettel](http://dirk.eddelbuettel.com/), [@eddelbuettel](https://twitter.com/eddelbuettel),

[If You Can't Beat 'Em...](http://dirk.eddelbuettel.com/papers/jsm2016_rcpp_talk.pdf)

- Mike Kane, [@kaneplusplus](https://twitter.com/kaneplusplus),

[Grammars and Structures for Computing with Data](http://slides.com/michaelkane/deck-17#/)

#### [7 Statistical Learning of Health Care Systems](https://www.amstat.org/meetings/jsm/2016/onlineprogram/ActivityDetails.cfm?SessionID=212491)

- Becky McNeil, [@biostatbecky](https://twitter.com/biostatbecky),

[Two case studies of statistical approaches that simplify the VHA learning health care system](https://github.com/bmcneil/Presentations)

#### [26 Distinguishing Between Statistics Education for Undergraduate and Graduate Nonstatistics Major Students](https://www.amstat.org/meetings/jsm/2016/onlineprogram/ActivityDetails.cfm?SessionID=212717)

- [Matt Hayat](http://publichealth.gsu.edu/profile/matt-hayat/), [Literature](http://bit.ly/MJHjsm2016)

- [MyoungJin Kim](http://nursing.illinoisstate.edu/faculty-staff/profile.php?ulid=mkim2), [Technology](http://bit.ly/MJKjsm2016)

- [Todd Schwartz](http://sph.unc.edu/adv_profile/todd-schwartz-drph/), [Datasets](http://bit.ly/TSjsm2016v2)

- [Mike Jiroutek](http://www.campbell.edu/cphs/faculty/faculty-members/michael-r.-jiroutek), [Pedagogy](http://bit.ly/MRJjsm2016)

#### [33 Efficient Methods for Structured Large Genomics Data](https://www.amstat.org/meetings/jsm/2016/onlineprogram/ActivityDetails.cfm?SessionID=212892)

- Xiang Zhu, [@zhumaimai](https://twitter.com/zhumaimai),

[Bayesian large-scale multiple regression with summary statistics from genome-wide association studies](http://www.stat.uchicago.edu/~xiangzhu/JSM_20160731.pdf)

### 4:00pm - 5:50pm

#### [47 Making the Most of R Tools](https://www.amstat.org/meetings/jsm/2016/onlineprogram/ActivityDetails.cfm?SessionID=212343)

- Nicholas Horton, [@askdrstats](https://twitter.com/askdrstats),

[Thinking with Data using R and RStudio: powerful idioms for analysts](https://github.com/Amherst-Statistics/JSM2016-thinkwithR)

#### [51 Media and Statistics](https://www.amstat.org/meetings/jsm/2016/onlineprogram/ActivityDetails.cfm?SessionID=212366)

- Julie Rehmeyer, [@julierehmeyer](https://twitter.com/julierehmeyer),

[Bad statistics, bad reporting, bad impact on patients: The story of the PACE trial](http://www.slideshare.net/JulieRehmeyer/bad-statistics-bad-reporting-bad-impact-on-patients-the-story-of-the-pace-trial)

#### [54 Recent Advances in Information Visualization](https://www.amstat.org/meetings/jsm/2016/onlineprogram/ActivityDetails.cfm?SessionID=212554)

- [Zan Armstrong](http://blog.zanarmstrong.com/about/), [@zanstrong](https://twitter.com/zanstrong),

[Visualizing Statistics "Mix Effects" and Simpson's Paradox](https://docs.google.com/presentation/d/1TC9986iqrAe4cBH77kP-2sAf_i-W0jnxM9ZnGWq2S0w/edit#slide=id.p)

#### [69 Novel Methods in Causal and Mediation Analysis](https://www.amstat.org/meetings/jsm/2016/onlineprogram/ActivityDetails.cfm?SessionID=212850)

- Julian Wolfson, [@DrJWolfson](https://twitter.com/drjwolfson),

[Treatment Effect Heterogeneity Trees](https://drive.google.com/uc?export=download&id=0B7tyIRgneHdbVFAtd3UxeldlV00)

#### [74 Estimation and Learning in Graphical Models](https://www.amstat.org/meetings/jsm/2016/onlineprogram/ActivityDetails.cfm?SessionID=212918)

- Andee Kaplan, [@andeekaplan](https://twitter.com/andeekaplan),

[An exposition on the propriety of restricted Boltzmann machines](http://andeekaplan.com/rbm/presentations/jsm2016/)

#### [78 For the Love of the Game: Applications of Statistics in Sports](https://www.amstat.org/meetings/jsm/2016/onlineprogram/ActivityDetails.cfm?SessionID=212986)

- Brandon LeBeau, [@blebeau11](https://twitter.com/@blebeau11),

[Estimating NCAA Football Coaches’ Abilities An Application of Item Response Theory](http://educate-r.org/2016/07/31/jsm2016.html)

- Gregory Matthews, [@StatsInTheWild](https://twitter.com/StatsInTheWild),

[An Examination of Statistical Disclosure Issues Related to Publication of Aggregate Statistics in the Presence of a Known Subset of the Data Set Using Baseball Hall of Fame Ballots](https://dl.dropboxusercontent.com/u/35094868/SlidesForTalk.pdf)

---

## Monday, 1 August

### 8:30am - 10:20am

#### [7 Applied Data Visualization in Industry and Journalism](https://www.amstat.org/meetings/jsm/2016/onlineprogram/ActivityDetails.cfm?SessionID=212543)

- [Jeff Leek](http://jtleek.com), [@jtleek](https://twitter.com/jtleek),

[Data Science as a Science](http://www.slideshare.net/jtleek/data-science-as-a-science)

#### [135 Advanced Methods for Statistics in Sports](https://www.amstat.org/meetings/jsm/2016/onlineprogram/ActivityDetails.cfm?SessionID=212985)

- Scott Powers, [@saberpowers](https://twitter.com/saberpowers),

[Nuclear Penalized Multinomial Regression for Predicting At-Bat Outcomes in Baseball](https://github.com/saberpowers/npmr/blob/master/slides/jsm2016.pdf)

- Sameer Deshpande, [A Bayesian Hierarchical Model of Pitch Framing in Major League Baseball](http://stat.wharton.upenn.edu/~dsameer/pitchFraming/deshpande_jsm2016.pdf)

### 10:30am - 12:20pm

#### [142 The Extraordinary Impacts of Statistics in Genomics and Genetics](https://www.amstat.org/meetings/jsm/2016/onlineprogram/ActivityDetails.cfm?SessionID=212335)

- [John Storey](http://genomine.org/), [@storeylab](https://github.com/storeylab),

[Latent Variable Methods for the Analysis of Genomic Data](http://genomine.org/talks/jsm_2016.pdf)

- [Rafael Irizarry](http://rafalab.dfci.harvard.edu/), [@rafalab](https://github.com/rafalab),

[Overcoming bias and batch effects in RNA-seq data](http://rafalab.github.io/talks/JSM-2016.pdf)

\[[related paper on bioRxiv](http://www.biorxiv.org/content/early/2015/08/28/025767)\]

#### [170 SPEED: Statistics for Education and Social Sciences Research](http://ww2.amstat.org/meetings/jsm/2016/onlineprogram/ActivityDetails.cfm?SessionID=213158)

- [Amelia McNamara](http://www.science.smith.edu/~amcnamara/), [@AmeliaMN](https://twitter.com/AmeliaMN), [	Pushing the Boundary Between Tools for Learning and for Doing Statistics](http://www.science.smith.edu/~amcnamara/JSM2016_PushingTheBoundary.pdf)

### 2:00pm - 3:50pm

#### [228 The Extraordinary Power of Statistical Collaboration](https://www.amstat.org/meetings/jsm/2016/onlineprogram/ActivityDetails.cfm?SessionID=212605)

- [Eric Vance](http://ervance.com), [@ervance](https://twitter.com/ervance),

[The Extraordinary Potential of Statistical Collaboration Laboratories](https://prezi.com/dpiwuz7pep45/2016jsmeposcl/)

#### [247 Toward Better Communication of Information with Statistical Graphics](https://www.amstat.org/meetings/jsm/2016/onlineprogram/ActivityDetails.cfm?SessionID=212912)

- [Susan VanderPlas](http://srvanderplas.github.io), [@srvanderplas](https://twitter.com/srvanderplas),

[Clusters Beat Trend!? Testing Feature Hierarchy in Statistical Graphics](https://srvanderplas.github.io/Presentations/JSM2016/HierarchyOfVisualFeatures.html#/)

#### [257 Motivating and Teaching Advanced Biostatistical Topics](https://www.amstat.org/meetings/jsm/2016/onlineprogram/ActivityDetails.cfm?SessionID=213006)

- Pierre-Jérôme Bergeron,

  [Valar Morghulis: A Survival Analysis of a Song of Ice and Fire](https://dl.dropboxusercontent.com/u/38003000/bergeronJSM2016.pdf)

---

## Tuesday, 2 August

### 8:30am - 10:20am

#### [288 Economic and Business Applications in High-Dimensional Big Data Contexts](https://www.amstat.org/meetings/jsm/2016/onlineprogram/ActivityDetails.cfm?SessionID=212479)

- [Christian Hansen](http://www.chicagobooth.edu/faculty/directory/h/christian-b-hansen), [Double Machine Learning for Treatment and Causal Parameters](https://github.com/kbroman/JSM2016slides/blob/master/slides/slides_MLInf_7_25_16_CH.pdf)[[arxiv](https://arxiv.org/abs/1608.00060v1)]

### 10:30am - 12:20pm

#### [326 Controversies: Past, Present, and Future -- Statistical Issues in Reproducibility](https://www.amstat.org/meetings/jsm/2016/onlineprogram/ActivityDetails.cfm?SessionID=212307)

- Fernando Martel Garcia, [Replication and the Manufacture of Scientific Inferences: A Formal Approach](https://dl.dropboxusercontent.com/u/15842577/presentation_amstat_Aug_2016b.pdf)

#### [332 Doing More with Data in and Outside the Undergraduate Classroom](https://www.amstat.org/meetings/jsm/2016/onlineprogram/ActivityDetails.cfm?SessionID=212444)

- [Colin Rundel](http://www2.stat.duke.edu/~cr173/), [@rundel](https://twitter.com/rundel),

[Statistical computing as an introduction to data science](https://github.com/rundel/Presentations/tree/master/JSM%202016)

#### [352 SPEED: Advances in Biometrics](https://www.amstat.org/meetings/jsm/2016/onlineprogram/ActivityDetails.cfm?SessionID=213147)

- [Jean V. Adams](https://profile.usgs.gov/jvadams), [@JeanVAdams](https://twitter.com/JeanVAdams),

[Fish Cliques: Evidence of Social Groups from Sparse Observations in Time and Space?](https://speakerdeck.com/jvadams/fish-cliques-evidence-of-social-groups-from-sparse-observations-in-time-and-space)

### 2:00pm - 3:50pm

#### [407 Interactive Visualizations and Web Applications for Analytics](https://www.amstat.org/meetings/jsm/2016/onlineprogram/ActivityDetails.cfm?SessionID=212551)

- [Carson Sievert](http://cpsievert.github.io/), [@cpsievert](https://twitter.com/cpsievert),

[Interactive and Dynamic Web-Based Graphics for Data Analysis](http://bit.ly/JSM_16)

- [Yihui Xie](http://yihui.name/), [@xieyihui](https://twitter.com/xieyihui),

[HTML Widgets: Interactive Visualizations from R Made Easy!](https://dl.dropboxusercontent.com/u/15335397/slides/2016-htmlwidgets-JSM-Yihui-Xie.html)

#### [418 Biometrics Section Student Paper Award Session 2](https://www.amstat.org/meetings/jsm/2016/onlineprogram/ActivityDetails.cfm?sessionid=212749)

- [Keegan Korthauer](http://bcb.dfci.harvard.edu/~keegan/index.html), [@keegsdur](https://twitter.com/keegsdur), [scDD: A Statistical Approach for Identifying Differential Distributions in Single-Cell RNA-Seq Experiments](http://bcb.dfci.harvard.edu/~keegan/talks/JSM_2016_Korthauer_Session_418.pdf)

#### [451 SPEED: Advances in Biometrics, Part 2B](https://www.amstat.org/meetings/jsm/2016/onlineprogram/ActivityDetails.cfm?SessionID=213218)

- [Jean V. Adams](https://profile.usgs.gov/jvadams), [@JeanVAdams](https://twitter.com/JeanVAdams),

[Fish Cliques: Evidence of Social Groups from Sparse Observations in Time and Space?](https://speakerdeck.com/jvadams/fish-cliques-evidence-of-social-groups-from-sparse-observations-in-time-and-space-1)

---

## Wednesday, 3 August

### 8:30am - 10:20am

#### [465 Data Science for Health Policy: A Broad Tent ](https://www.amstat.org/meetings/jsm/2016/onlineprogram/ActivityDetails.cfm?SessionID=212330)

- [Jenna Krall](http://jennakrall.com), [@kralljr](https://twitter.com/kralljr), [Identifying the Most Harmful Sources of Ambient Air Pollution to Better Protect Public Health](http://jennakrall.com/krall-jsm-2016.pdf)

#### [475 Reproducibility in Statistics and Data Science ](https://www.amstat.org/meetings/jsm/2016/onlineprogram/ActivityDetails.cfm?SessionID=212538)

- [Jenny Bryan](http://stat545.com), [@jennybryan](https://twitter.com/jennybryan),

[Reproducibility for All and Our Love/Hate Relationship with Spreadsheets](https://github.com/jennybc/2016-06_spreadsheets#readme)

- [Karl Broman](http://kbroman.org),

[Steps Toward Reproducible Research](http://bit.ly/jsm2016)

- [Karthik Ram](http://karthik.io/),

  [@_inundata](https://twitter.com/_inundata),

  [Enough with trickle down reproducibility: scientists, open this gate! scientists, tear down this wall!](http://inundata.org/talks/jsm2016) 

- [Mine Çetinkaya-Rundel](http://www2.stat.duke.edu/~mc301/),

[@minebocek](https://twitter.com/minebocek),

[Integrating reproducibility into the undergraduate statistics curriculum](https://github.com/mine-cetinkaya-rundel/2016-08-03-reproducible-undergrad-stats)

- [Yihui Xie](http://yihui.name/), [@xieyihui](https://twitter.com/xieyihui),

[Reproducibility in Statistics and Data Science (Discussion)](https://dl.dropboxusercontent.com/u/15335397/slides/2016-repro-JSM-Yihui-Xie.html#(1))

#### [486 Estimating the Properties of Physical Time Series by Leveraging the Power of Spectral Analysis](https://www.amstat.org/meetings/jsm/2016/onlineprogram/ActivityDetails.cfm?SessionID=212827)

- [Wesley S. Burr](http://www.wesleyburr.com), [@wsburr](https://twitter.com/wsburr), [Phase as Lag: Synthetic Lag Models for Risk Estimation in Environmental Epidemiology](https://wesleyburr.github.io/Talk_JSM2016/)

- [Josh Pohlkamp-Hartt](https://www.linkedin.com/in/jpohlkamphartt), [Extraction of Atrial Signals From Electrocardiograms](https://github.com/wesleyburr/Talk_JSM2016/blob/master/JSM%202016%20JPohlkampHartt.pdf)

#### [492 SPEED: Advances in Survey Research Methodology](https://www.amstat.org/meetings/jsm/2016/onlineprogram/ActivityDetails.cfm?SessionID=213155)

- Stanislav Kolenikov, [@StatStas](https://twitter.com/StatStas),

[Sampling with Minimal Strata Sample Size Requirements](https://github.com/skolenik/jsm2016slides)

#### [499 Statistical Learning Approaches to Biological Inference Problems](https://www.amstat.org/meetings/jsm/2016/onlineprogram/ActivityDetails.cfm?SessionID=212935)

- [Neal Grantham](http://nsgrantham.github.io), [@nsgrantham](https://twitter.com/nsgrantham), [Deep Spatial Learning for Forensic Geolocation with Microbiome Data](http://nsgrantham.github.io/documents/jsm-2016.pdf)

### 10:30am - 12:20pm

#### [520 Machine Learning in Econometrics](https://www.amstat.org/meetings/jsm/2016/onlineprogram/ActivityDetails.cfm?SessionID=212663)

- [Qingyuan Zhao](http://web.stanford.edu/~qyzhao/) [Causal Interpretations of Black-Box Models](http://web.stanford.edu/~qyzhao/papers/pdp_slides.pdf)

#### [526 The 2016 Statistical Computing and Graphics Award Honors William S. Cleveland](https://www.amstat.org/meetings/jsm/2016/onlineprogram/ActivityDetails.cfm?SessionID=212769)

- [Dianne Cook](http://dicook.github.io/), [@visnut](https://twitter.com/visnut), Modern Crowd-Sourcing Validates Cleveland's 1984 Hierarchy of Graphical Elements \[[survey](http://bit.ly/JSM-vis16) | [results](http://visiphilia.org/2016/08/03/CM-hierarchy)\]

- [Luke Tierney](http://homepage.divms.uiowa.edu/~luke/),

  [Some reflections on dynamic graphics for data exploration](http://homepage.divms.uiowa.edu/~luke/talks/jsm2016.pdf)

  - [Video Library](http://stat-graphics.org/movies/), ASA Sections on Statistical Computing and

    Statistical Graphics

### 2:00pm - 3:50pm

#### [593 Batch Effects in Genomics Data](https://www.amstat.org/meetings/jsm/2016/onlineprogram/ActivityDetails.cfm?SessionID=212439)

- David Risso, [@drisso1893](https://twitter.com/drisso1893),

[Design and normalization of single-cell RNA-seq](http://rpubs.com/daviderisso/jsm2016)

#### [600 When the Plot Is Not the End: Advances in Computing and Reasoning on Data Visualizations](https://www.amstat.org/meetings/jsm/2016/onlineprogram/ActivityDetails.cfm?SessionID=212826)

- Barret Schloerke, [@schloerke](https://twitter.com/schloerke),

[Cognostics: Metrics Enabling Detailed Interactive Visualization of Big Data](https://www.odrive.com/s/e2519606-0fc9-49ef-a058-5aadc88bebf5-57a2530e)

---

## Thursday, 4 August

### 8:30am - 10:20am

#### [632 Julia for Modern Statistical Computing](https://www.amstat.org/meetings/jsm/2016/onlineprogram/ActivityDetails.cfm?SessionID=212487)

- [Josh Day](https://joshday.github.io), [OnlineStats.jl for Streaming and Big Data](https://github.com/joshday/OnlineStats_JSM2016)

#### [652 Big Data and Data Science Education](http://ww2.amstat.org/meetings/jsm/2016/onlineprogram/ActivityDetails.cfm?SessionID=212899)

- [Robin Lock](http://it.stlawu.edu/~rlock/), [DataSurfing on the World Wide Web: Part 2](http://myslu.stlawu.edu/~rlock/data2016.html) ([Part 1, from JSM 1996](http://it.stlawu.edu/~rlock/data96/))