https://github.com/kdm9/bamcb2rg
BAM utility that swaps the CB (cell barcode) and RG tags, such that each cell is considered a sample in variant calling
https://github.com/kdm9/bamcb2rg
Last synced: about 2 months ago
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BAM utility that swaps the CB (cell barcode) and RG tags, such that each cell is considered a sample in variant calling
- Host: GitHub
- URL: https://github.com/kdm9/bamcb2rg
- Owner: kdm9
- License: mpl-2.0
- Created: 2019-07-03T03:54:22.000Z (almost 6 years ago)
- Default Branch: master
- Last Pushed: 2019-07-03T04:41:16.000Z (almost 6 years ago)
- Last Synced: 2025-02-14T18:52:11.628Z (4 months ago)
- Language: Python
- Size: 9.77 KB
- Stars: 0
- Watchers: 0
- Forks: 0
- Open Issues: 0
-
Metadata Files:
- Readme: README.md
- License: LICENSE
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README
# bamCB2RG
BAM utility that swaps the CB (cell barcode) and RG tags, such that each cell
is considered a sample in variant calling
To install:
```bash
pip3 install -e 'git+https://github.com/kdmurray91/bamCB2RG#egg=bamCB2RG'
```