https://github.com/kdm9/nvtk

Tools for managing natural variation collections
https://github.com/kdm9/nvtk

Last synced: 19 days ago
JSON representation

Tools for managing natural variation collections

• Host: GitHub
• URL: https://github.com/kdm9/nvtk
• Owner: kdm9
• Created: 2021-12-10T11:04:12.000Z (almost 3 years ago)
• Default Branch: main
• Last Pushed: 2024-08-29T05:07:05.000Z (3 months ago)
• Last Synced: 2024-10-11T19:22:40.796Z (about 1 month ago)
• Language: Python
• Size: 402 KB
• Stars: 4
• Watchers: 1
• Forks: 1
• Open Issues: 0
• Metadata Files:
  • Readme: README.md

Awesome Lists containing this project

README

        
# NVTK

Tools for Natural Variation collections.

(pron. *en-vee-toolkit*)

[![DOI](https://zenodo.org/badge/DOI/10.5281/zenodo.10049943.svg)](https://doi.org/10.5281/zenodo.10049943)

# AccessionTK

Tools to take a table of accession data and associated photos and generate

beautiful HTML summaries.

# QRmagic

Tools to sort images the QR codes they contain (see

), and also to print Avery-style sheet labels.

# Site-sheet-maker

A tool that can add a templated QR code to a form as SVG, for when simple

labels aren't enough. We mostly use this for field collection forms, but it's

totally generic.

# Platemate

Tools for working with samples in 96-well plates:

- Convert between various plate layouts: 

- Normalise DNA concentrations as measured with flurometeric dyes and a plate reader (e.g. PicoGreen): 

- Create plate layout samplesheets for sequencing, with our extended nextera adapter set 

# License

## MPL2

> This Source Code Form is subject to the terms of the Mozilla Public

> License, v. 2.0. If a copy of the MPL was not distributed with this

> file, You can obtain one at http://mozilla.org/MPL/2.0/.

## Author

[Dr. K. D. Murray](https://kdmurray.id.au), [Weigel Group, Max Planck Insitute for Biology, Tübingen, DE](https://weigelworld.org).